Detail information of GWHGAAZE002426


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008342154.17.76403E-49PREDICTED: protein-tyrosine-phosphatase IBR5-like isoform X2 [Malus domestica]
Swissprottr|Q84JU4|IBR5_ARATH4E-42Protein-tyrosine-phosphatase IBR5
trEMBLtr|A0A0A0KJP0|A0A0A0KJP0_CUCSA4E-48Uncharacterized protein {ECO:0000313|EMBL:KGN47976.1}
TAIR10AT2G04550.11E-34indole-3-butyric acid response 5

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene7851074478511010-
GWHAAZE00000001mRNA7851074478511010-
GWHAAZE00000001exon7851074478511010-
GWHAAZE00000001CDS7851074478511010-
Transcript Sequence

Network for GWHGAAZE002426

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K04459DUSP, MKP MAPK signaling pathway map04010
Axon regenerationmap04361

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf31.794
SRR3591706second leaf14.505
SRR3591707mature leaf11.279
SRR3591708Shoot apex24.214
SRR3591709Stem25.789
SRR3591710White floral bud30.691
SRR3591711White flower34.623
SRR3591712Green floral bud27.325
SRR3591713Yellow flower30.482
SRP173429 SRR8316895Juvenile bud stage 10.905
SRR8316896Juvenile bud stage 19.454
SRR8316897Juvenile bud stage 10.706
SRR8316894Third green stage 11.833
SRR8316900Third green stage 33.884
SRR8316901Third green stage 34.680
SRR8316898Complete white stage 19.336
SRR8316899Complete white stage 41.845
SRR8316903Complete white stage 27.754
SRR8316902Silver flowering stage12.716
SRR8316904Silver flowering stage19.599
SRR8316905Silver flowering stage13.163
SRR8316906Gold flowering stage 35.804
SRR8316907Gold flowering stage 43.445
SRR8316908Gold flowering stage 44.507
SRP132670SRR6706286Control31.479
SRR6706287Light intensity 50%31.770
SRR6706288Light intensity 20%36.651
CNP0000432CNS0095592Slightly white alabastrum(diploid) 120.920
CNS0095593Slightly white alabastrum(diploid) 218.891
CNS0095594Slightly white alabastrum(diploid) 313.155
CNS0095595Whole white alabastrum(diploid) 225.441
CNS0095596Whole white alabastrum(diploid) 318.244
CNS0095597Whole white alabastrum(diploid) 418.244
CNS0095598Silvery flower (diploied) 121.974
CNS0095599Silvery flower (diploied) 216.663
CNS0095600Silvery flower (diploied) 331.222
CNS0095601Golden flower (diploid) 114.576
CNS0095602Golden flower (diploid) 227.207
CNS0095603Golden flower (diploid) 332.098
CNS0095604Slightly white alabastrum(tetraploid) 124.324
CNS0095605Slightly white alabastrum(tetraploid) 222.296
CNS0095606Slightly white alabastrum(tetraploid) 329.821
CNS0095607Whole white alabastrum(tetraploid) 131.205
CNS0095608Whole white alabastrum(tetraploid) 223.616
CNS0095609Whole white alabastrum(tetraploid) 328.971
CNS0095610Silvery flower (tetraploid) 133.524
CNS0095611Silvery flower (tetraploid) 236.012
CNS0095612Silvery flower (tetraploid) 331.687
CNS0095613Golden flower (tetraploid) 124.501
CNS0095614Golden flower (tetraploid) 224.066
CNS0095615Golden flower (tetraploid) 339.811
CRA001975CRR073297Stem 119.966
CRR073298Stem 219.018
CRR073299Stem 326.098
CRR073300Leaf 125.082
CRR073301Leaf 223.880
CRR073302Leaf 327.708
CRR073303Juvenile bud 130.488
CRR073304Juvenile bud 230.600
CRR073305Juvenile bud 330.468
CRR073306Third green 123.688
CRR073307Third green 230.560
CRR073308Third green 325.424
CRR073309Second white 123.859
CRR073310Second white 219.088
CRR073311Second white 321.393
CRR073312Silver flowering 119.901
CRR073313Silver flowering 226.845
CRR073314Silver flowering 319.518
CRR073315Gold flowering 122.967
CRR073316Gold flowering 216.615
CRR073317Gold flowering 312.788
CRR073318Tawny withering 121.376
CRR073319Tawny withering 216.842
CRR073320Tawny withering 326.998