Detail information of GWHGAAZE002358


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009795967.13.58556E-39PREDICTED: uncharacterized protein LOC104242589 [Nicotiana sylvestris]
trEMBLtr|K4DBC9|K4DBC9_SOLLC4E-37Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc12g005910.1.1}
TAIR10AT5G42570.13E-27B-cell receptor-associated 31-like

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene7682445076825333+
GWHAAZE00000001mRNA7682445076825333+
GWHAAZE00000001exon7682445076824726+
GWHAAZE00000001exon7682526076825333+
GWHAAZE00000001CDS7682445076824726+
GWHAAZE00000001CDS7682526076825333+
Transcript Sequence

Network for GWHGAAZE002358

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14009BCAP31, BAP31 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf130.694
SRR3591706second leaf34.201
SRR3591707mature leaf24.015
SRR3591708Shoot apex67.121
SRR3591709Stem44.837
SRR3591710White floral bud98.276
SRR3591711White flower95.883
SRR3591712Green floral bud99.723
SRR3591713Yellow flower54.626
SRP173429 SRR8316895Juvenile bud stage 165.068
SRR8316896Juvenile bud stage 237.853
SRR8316897Juvenile bud stage 140.109
SRR8316894Third green stage 35.932
SRR8316900Third green stage 126.141
SRR8316901Third green stage 164.286
SRR8316898Complete white stage 87.732
SRR8316899Complete white stage 239.620
SRR8316903Complete white stage 96.910
SRR8316902Silver flowering stage67.881
SRR8316904Silver flowering stage98.953
SRR8316905Silver flowering stage40.654
SRR8316906Gold flowering stage 110.467
SRR8316907Gold flowering stage 134.017
SRR8316908Gold flowering stage 121.380
SRP132670SRR6706286Control173.172
SRR6706287Light intensity 50%166.768
SRR6706288Light intensity 20%177.815
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1136.899
CNS0095593Slightly white alabastrum(diploid) 2222.756
CNS0095594Slightly white alabastrum(diploid) 3172.157
CNS0095595Whole white alabastrum(diploid) 2197.284
CNS0095596Whole white alabastrum(diploid) 385.126
CNS0095597Whole white alabastrum(diploid) 4109.481
CNS0095598Silvery flower (diploied) 1190.905
CNS0095599Silvery flower (diploied) 2268.011
CNS0095600Silvery flower (diploied) 3212.355
CNS0095601Golden flower (diploid) 1266.784
CNS0095602Golden flower (diploid) 2292.673
CNS0095603Golden flower (diploid) 3286.256
CNS0095604Slightly white alabastrum(tetraploid) 190.897
CNS0095605Slightly white alabastrum(tetraploid) 280.541
CNS0095606Slightly white alabastrum(tetraploid) 3100.624
CNS0095607Whole white alabastrum(tetraploid) 181.485
CNS0095608Whole white alabastrum(tetraploid) 266.191
CNS0095609Whole white alabastrum(tetraploid) 3110.364
CNS0095610Silvery flower (tetraploid) 1106.896
CNS0095611Silvery flower (tetraploid) 2114.544
CNS0095612Silvery flower (tetraploid) 3134.434
CNS0095613Golden flower (tetraploid) 150.668
CNS0095614Golden flower (tetraploid) 280.385
CNS0095615Golden flower (tetraploid) 381.540
CRA001975CRR073297Stem 1137.820
CRR073298Stem 2135.640
CRR073299Stem 3134.807
CRR073300Leaf 1206.514
CRR073301Leaf 2220.199
CRR073302Leaf 3144.839
CRR073303Juvenile bud 1210.128
CRR073304Juvenile bud 2177.557
CRR073305Juvenile bud 3168.082
CRR073306Third green 1170.688
CRR073307Third green 2171.313
CRR073308Third green 3148.452
CRR073309Second white 1168.165
CRR073310Second white 2137.108
CRR073311Second white 3100.896
CRR073312Silver flowering 1144.515
CRR073313Silver flowering 2195.420
CRR073314Silver flowering 3179.032
CRR073315Gold flowering 192.186
CRR073316Gold flowering 2134.061
CRR073317Gold flowering 3109.304
CRR073318Tawny withering 1135.346
CRR073319Tawny withering 2160.627
CRR073320Tawny withering 371.510