Detail information of GWHGAAZE002311


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011091859.14.73346E-65PREDICTED: peptidyl-prolyl cis-trans isomerase CYP22 isoform X1 [Sesamum indicum]
COGYP_005366669.15E-30peptidyl-prolyl cis-trans isomerase
Swissprottr|Q9ZVJ4|CYP22_ARATH4E-62Peptidyl-prolyl cis-trans isomerase CYP22
trEMBLtr|B9GX77|B9GX77_POPTR6E-64Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}
TAIR10AT2G38730.19E-50Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene7550219975504291+
GWHAAZE00000001mRNA7550219975504291+
GWHAAZE00000001exon7550219975502327+
GWHAAZE00000001exon7550290475502936+
GWHAAZE00000001exon7550340075503456+
GWHAAZE00000001exon7550418175504291+
GWHAAZE00000001CDS7550219975502327+
GWHAAZE00000001CDS7550290475502936+
GWHAAZE00000001CDS7550340075503456+
GWHAAZE00000001CDS7550418175504291+
Transcript Sequence

Network for GWHGAAZE002311

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00160.22Pro_isomerase241075.80E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09567PPIH, CYPH Spliceosome map03040

Gene Ontology

GO term OntologyName
GO:0000413biological_processprotein peptidyl-prolyl isomerization
GO:0003755molecular_functionpeptidyl-prolyl cis-trans isomerase activity

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE002311.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 30102030405060708090100110Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf59.770
SRR3591706second leaf41.140
SRR3591707mature leaf47.104
SRR3591708Shoot apex93.826
SRR3591709Stem45.009
SRR3591710White floral bud48.621
SRR3591711White flower62.925
SRR3591712Green floral bud66.522
SRR3591713Yellow flower43.692
SRP173429 SRR8316895Juvenile bud stage 51.804
SRR8316896Juvenile bud stage 70.924
SRR8316897Juvenile bud stage 30.036
SRR8316894Third green stage 25.204
SRR8316900Third green stage 79.866
SRR8316901Third green stage 73.550
SRR8316898Complete white stage 25.565
SRR8316899Complete white stage 89.692
SRR8316903Complete white stage 35.809
SRR8316902Silver flowering stage24.991
SRR8316904Silver flowering stage25.129
SRR8316905Silver flowering stage10.170
SRR8316906Gold flowering stage 45.115
SRR8316907Gold flowering stage 47.402
SRR8316908Gold flowering stage 44.577
SRP132670SRR6706286Control43.667
SRR6706287Light intensity 50%43.973
SRR6706288Light intensity 20%47.899
CNP0000432CNS0095592Slightly white alabastrum(diploid) 195.235
CNS0095593Slightly white alabastrum(diploid) 298.732
CNS0095594Slightly white alabastrum(diploid) 387.719
CNS0095595Whole white alabastrum(diploid) 278.433
CNS0095596Whole white alabastrum(diploid) 378.773
CNS0095597Whole white alabastrum(diploid) 463.428
CNS0095598Silvery flower (diploied) 161.902
CNS0095599Silvery flower (diploied) 276.513
CNS0095600Silvery flower (diploied) 351.783
CNS0095601Golden flower (diploid) 172.926
CNS0095602Golden flower (diploid) 258.922
CNS0095603Golden flower (diploid) 356.145
CNS0095604Slightly white alabastrum(tetraploid) 180.412
CNS0095605Slightly white alabastrum(tetraploid) 275.934
CNS0095606Slightly white alabastrum(tetraploid) 384.495
CNS0095607Whole white alabastrum(tetraploid) 164.837
CNS0095608Whole white alabastrum(tetraploid) 243.125
CNS0095609Whole white alabastrum(tetraploid) 367.386
CNS0095610Silvery flower (tetraploid) 144.946
CNS0095611Silvery flower (tetraploid) 249.668
CNS0095612Silvery flower (tetraploid) 338.920
CNS0095613Golden flower (tetraploid) 137.059
CNS0095614Golden flower (tetraploid) 243.579
CNS0095615Golden flower (tetraploid) 329.071
CRA001975CRR073297Stem 164.125
CRR073298Stem 275.084
CRR073299Stem 376.737
CRR073300Leaf 172.134
CRR073301Leaf 269.916
CRR073302Leaf 368.226
CRR073303Juvenile bud 161.695
CRR073304Juvenile bud 252.432
CRR073305Juvenile bud 337.328
CRR073306Third green 114.256
CRR073307Third green 219.182
CRR073308Third green 319.964
CRR073309Second white 122.192
CRR073310Second white 227.094
CRR073311Second white 316.316
CRR073312Silver flowering 118.268
CRR073313Silver flowering 213.934
CRR073314Silver flowering 38.580
CRR073315Gold flowering 156.401
CRR073316Gold flowering 245.658
CRR073317Gold flowering 332.688
CRR073318Tawny withering 174.941
CRR073319Tawny withering 253.876
CRR073320Tawny withering 346.686