Gene detail

Detail information of GWHGAAZE002164

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002517893.1	0	conserved hypothetical protein [Ricinus communis]
COG	YP_004493628.1	0.00000006	bifunctional wax ester synthase/acyl-coadiacylglycerol acyltransferase
Swissprot	tr\|Q93ZR6\|WSD1_ARATH	3E-39	O-acyltransferase WSD1
trEMBL	tr\|B9RVX4\|B9RVX4_RICCO	0	Putative uncharacterized protein {ECO:0000313\|EMBL:EEF44411.1}
TAIR10	AT5G53390.1	6E-45	O-acyltransferase (WSD1-like) family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	71480768	71488305	+
GWHAAZE00000001	mRNA	71480768	71488305	+
GWHAAZE00000001	exon	71480768	71481007	+
GWHAAZE00000001	exon	71484366	71484950	+
GWHAAZE00000001	exon	71485993	71486355	+
GWHAAZE00000001	exon	71487042	71487179	+
GWHAAZE00000001	exon	71488091	71488305	+
GWHAAZE00000001	CDS	71480768	71481007	+
GWHAAZE00000001	CDS	71484366	71484950	+
GWHAAZE00000001	CDS	71485993	71486355	+
GWHAAZE00000001	CDS	71487042	71487179	+
GWHAAZE00000001	CDS	71488091	71488237	+
GWHAAZE00000001	three_prime_UTR	71488238	71488305	+

Transcript Sequence
>GWHTAAZE002168 ATGGGGTGTAATAATGTTCGTGAACAAGAAGAGGAGGAAATATTAGAGCCAATGAGTCCAATGGGACAATTCATAAAGAGCTCTGTATTATCTTTCACCATTATTGGTGTCTTGGAATCCGAAATTCCAATTGATGACTCCAACACCATGGCTTTACTCCAAGATCTTTTCTTGCCCATCAACCCTAGGTTTTCTTCCATCTTGGTACTTTCTCTCTTCCCCCCCTCTCTCTCTCTCTACGTTGAAGAAAAGGATGGAGTAAAGAAATGGAAGAGAGTAAAAGTAAATCTCAAAGATCACATAGTCATCCCAACATTTCCCAAAATTGAAAATCCACCCTATCTATATGACCAAGACTTCAAAAACTATCTTGCAGAACTAAACTCCTCTCAACTCCCACAAAACCAACCCTTATGGGAAATTCACATAATCAAGTACCCAACCTCCGATGCGGCTGGCTACTTAATTTTCAAGCTCCACCACTCCCTTGGGGATGGCTACTCTCTAGTGGGTGCCCTTCTTTCTTGTCTACGTAGAGTCGATGATCCTTCTCTCCCTTTAACGTTCCCATCAATTCGATCGAATGTAGAGAAGAAGAAGAAAGGTGGCATTTTAAATTTTGTGATGACTGTGCCTAAAATTGTTTTTGGTGTTTTTAATACTTTATATGATTTCGGGTGGGACGTTTGGAAGAGTAATGTATGGGAGGATGACACTTCTCCGATTAGGTCTGGCACCGAAGGGGTGGAGTTCCAGCCAGTGGACATAACTACGGTGAACATTTCTCTTGACCGCATCAAGGAGATTAAGACCAAACTTAACGTGACAGTAAATGATGTGATAACTGGAGTGATAAACTTGGGGTGCCGATTATACATGCAACAAACAAGCTACGAATCCAGAAGCGCACATACAACAGGACTAGTTTTACTCAACACCAGATTTCTTTCTGCTCCTGCTGGCTACAAATCTGTTAGTGAGATGGTGAAACCTAATTCCAAAATGCCTTGGGGAAATTATTTTGCCTTTTTGAACGTATCGTTACCCAAATTAAACGACATAAATTTGTCGAATCCCCTCGAATTTGTCTACACAGCACAAAAAATGATCAACCGGAAGAAGAACTCTGCTGCAGTTTATGTGACCGGTTTTATGTTAGAGGCAATGAGGAGATTGGTTGGACCTCAGGTTGCATCAAAGTACATTCACAAAACCCTAAAACATGCGAGCGTAACAGTATCACATGTGATTGGACCAGACGACCGAATGGCCTTGGATAATCATCCTGTCAAAGGCTTGTATTTCTATGTTGCTGGTGATCCACAAAGCCTTGTGCTGACAATAATAAGTTATGCTGGAAGCCTGAGGATTGCTATTTTAGTGGAGAGAGGGTTTATAGATGCAGAGAAGTTCAAGTCATGCATTGAGAATGCCCTTGACATGGTCCACAAAGCTGCCTTTCGCTCTCCCTAATTCAACAAATCCCCAACGATAAATTCATGGAAACCTCACTTCCATTATTATCCCTTTTACATGTCTTT

Network for GWHGAAZE002164

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03007.17	WES_acyltransf	117	281	4.70E-12
PF06974.14	WS_DGAT_C	337	481	3.20E-36
PF07714.18	PK_Tyr_Ser-Thr	116	387	2.80E-52
PF00069.26	Pkinase	568	625	1.30E-12

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0045017	biological_process	glycerolipid biosynthetic process
GO:0006468	biological_process	protein phosphorylation
GO:0004144	molecular_function	diacylglycerol O-acyltransferase activity
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.106
	SRR3591706	second leaf	1.605
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	18.995
	SRR3591709	Stem	0.100
	SRR3591710	White floral bud	0.046
	SRR3591711	White flower	0.083
	SRR3591712	Green floral bud	0.000
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	7.692
	SRR8316896	Juvenile bud stage	5.416
	SRR8316897	Juvenile bud stage	0.896
	SRR8316894	Third green stage	0.518
	SRR8316900	Third green stage	0.057
	SRR8316901	Third green stage	0.077
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.834
	SRR8316903	Complete white stage	0.062
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.045
	SRR6706287	Light intensity 50%	0.066
	SRR6706288	Light intensity 20%	0.012
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	3.259
	CNS0095593	Slightly white alabastrum(diploid) 2	0.202
	CNS0095594	Slightly white alabastrum(diploid) 3	1.378
	CNS0095595	Whole white alabastrum(diploid) 2	0.034
	CNS0095596	Whole white alabastrum(diploid) 3	0.106
	CNS0095597	Whole white alabastrum(diploid) 4	0.248
	CNS0095598	Silvery flower (diploied) 1	0.417
	CNS0095599	Silvery flower (diploied) 2	0.232
	CNS0095600	Silvery flower (diploied) 3	0.071
	CNS0095601	Golden flower (diploid) 1	0.297
	CNS0095602	Golden flower (diploid) 2	0.163
	CNS0095603	Golden flower (diploid) 3	0.055
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.909
	CNS0095605	Slightly white alabastrum(tetraploid) 2	2.926
	CNS0095606	Slightly white alabastrum(tetraploid) 3	5.300
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.445
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.207
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.248
	CNS0095612	Silvery flower (tetraploid) 3	0.040
	CNS0095613	Golden flower (tetraploid) 1	0.024
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	10.429
	CRR073298	Stem 2	5.434
	CRR073299	Stem 3	9.588
	CRR073300	Leaf 1	0.174
	CRR073301	Leaf 2	0.000
	CRR073302	Leaf 3	0.080
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.104
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.455
	CRR073316	Gold flowering 2	0.391
	CRR073317	Gold flowering 3	0.903
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000