Detail information of GWHGAAZE002158


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007043627.10ADP/ATP carrier 3 isoform 1 [Theobroma cacao]
Swissprottr|O49447|ADT3_ARATH0ADP,ATP carrier protein 3, mitochondrial (Precursor)
trEMBLtr|A0A061EAZ2|A0A061EAZ2_THECC0ADP/ATP carrier 3 isoform 1 {ECO:0000313|EMBL:EOX99458.1}
TAIR10AT4G28390.14E-162ADP/ATP carrier 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene7134847971353947+
GWHAAZE00000001mRNA7134847971353947+
GWHAAZE00000001exon7134847971348952+
GWHAAZE00000001exon7135027871350649+
GWHAAZE00000001exon7135364871353947+
GWHAAZE00000001CDS7134847971348952+
GWHAAZE00000001CDS7135027871350649+
GWHAAZE00000001CDS7135364871353947+
Transcript Sequence

Network for GWHGAAZE002158

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00153.28Mito_carr791752.30E-23
PF00153.28Mito_carr1822758.60E-24
PF00153.28Mito_carr2843712.30E-16
PF16131.6Torus1461948.90E-07
PF00076.23RRM_12302888.00E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12872RBM22, SLT11 Spliceosome map03040
Calcium signaling pathwaymap04020
cGMP-PKG signaling pathwaymap04022
Necroptosismap04217
Cellular senescencemap04218

Gene Ontology

GO term OntologyName
GO:0055085biological_processtransmembrane transport
GO:0005743cellular_componentmitochondrial inner membrane
GO:0046872molecular_functionmetal ion binding
GO:0003676molecular_functionnucleic acid binding
GO:0022857molecular_functiontransmembrane transporter activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf43.758
SRR3591706second leaf22.308
SRR3591707mature leaf29.075
SRR3591708Shoot apex53.259
SRR3591709Stem34.769
SRR3591710White floral bud42.868
SRR3591711White flower56.604
SRR3591712Green floral bud65.313
SRR3591713Yellow flower57.511
SRP173429 SRR8316895Juvenile bud stage 56.321
SRR8316896Juvenile bud stage 85.791
SRR8316897Juvenile bud stage 34.080
SRR8316894Third green stage 29.519
SRR8316900Third green stage 88.020
SRR8316901Third green stage 80.538
SRR8316898Complete white stage 24.967
SRR8316899Complete white stage 85.921
SRR8316903Complete white stage 39.269
SRR8316902Silver flowering stage22.693
SRR8316904Silver flowering stage26.686
SRR8316905Silver flowering stage14.160
SRR8316906Gold flowering stage 51.039
SRR8316907Gold flowering stage 48.470
SRR8316908Gold flowering stage 54.459
SRP132670SRR6706286Control74.372
SRR6706287Light intensity 50%73.510
SRR6706288Light intensity 20%80.923
CNP0000432CNS0095592Slightly white alabastrum(diploid) 172.568
CNS0095593Slightly white alabastrum(diploid) 277.265
CNS0095594Slightly white alabastrum(diploid) 363.089
CNS0095595Whole white alabastrum(diploid) 255.720
CNS0095596Whole white alabastrum(diploid) 362.336
CNS0095597Whole white alabastrum(diploid) 451.127
CNS0095598Silvery flower (diploied) 156.926
CNS0095599Silvery flower (diploied) 249.167
CNS0095600Silvery flower (diploied) 365.765
CNS0095601Golden flower (diploid) 155.255
CNS0095602Golden flower (diploid) 273.993
CNS0095603Golden flower (diploid) 371.486
CNS0095604Slightly white alabastrum(tetraploid) 182.584
CNS0095605Slightly white alabastrum(tetraploid) 278.413
CNS0095606Slightly white alabastrum(tetraploid) 399.155
CNS0095607Whole white alabastrum(tetraploid) 153.271
CNS0095608Whole white alabastrum(tetraploid) 247.840
CNS0095609Whole white alabastrum(tetraploid) 382.792
CNS0095610Silvery flower (tetraploid) 163.579
CNS0095611Silvery flower (tetraploid) 280.112
CNS0095612Silvery flower (tetraploid) 360.526
CNS0095613Golden flower (tetraploid) 149.376
CNS0095614Golden flower (tetraploid) 264.737
CNS0095615Golden flower (tetraploid) 367.658
CRA001975CRR073297Stem 1127.314
CRR073298Stem 2118.232
CRR073299Stem 3133.631
CRR073300Leaf 1129.503
CRR073301Leaf 2133.382
CRR073302Leaf 3150.571
CRR073303Juvenile bud 1138.635
CRR073304Juvenile bud 2113.941
CRR073305Juvenile bud 3131.403
CRR073306Third green 157.326
CRR073307Third green 248.035
CRR073308Third green 352.783
CRR073309Second white 173.130
CRR073310Second white 258.640
CRR073311Second white 351.563
CRR073312Silver flowering 169.802
CRR073313Silver flowering 275.465
CRR073314Silver flowering 355.287
CRR073315Gold flowering 158.759
CRR073316Gold flowering 275.740
CRR073317Gold flowering 368.699
CRR073318Tawny withering 1101.388
CRR073319Tawny withering 285.438
CRR073320Tawny withering 3115.480