Detail information of GWHGAAZE002048


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007215447.10hypothetical protein PRUPE_ppa006349mg [Prunus persica]
COGYP_008149401.13E-24hypothetical protein SCE1572_14835
Swissprottr|Q39010|KSG6_ARATH0Shaggy-related protein kinase zeta
trEMBLtr|M5WTU1|M5WTU1_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ16646.1}
TAIR10AT2G30980.10SHAGGY-related protein kinase dZeta

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene6787768867892124-
GWHAAZE00000001mRNA6787768867892124-
GWHAAZE00000001exon6787768867878360-
GWHAAZE00000001exon6788051767880618-
GWHAAZE00000001exon6788104467881127-
GWHAAZE00000001exon6788183367881928-
GWHAAZE00000001exon6788202067882070-
GWHAAZE00000001exon6788219067882330-
GWHAAZE00000001exon6788959567889651-
GWHAAZE00000001exon6788973367889807-
GWHAAZE00000001exon6788988867890160-
GWHAAZE00000001exon6789024567890304-
GWHAAZE00000001exon6789060867890700-
GWHAAZE00000001exon6789199667892124-
GWHAAZE00000001five_prime_UTR6789211367892124-
GWHAAZE00000001CDS6789199667892112-
GWHAAZE00000001CDS6789060867890700-
GWHAAZE00000001CDS6789024567890304-
GWHAAZE00000001CDS6788988867890160-
GWHAAZE00000001CDS6788973367889807-
GWHAAZE00000001CDS6788959567889651-
GWHAAZE00000001CDS6788219067882330-
GWHAAZE00000001CDS6788202067882070-
GWHAAZE00000001CDS6788183367881928-
GWHAAZE00000001CDS6788104467881127-
GWHAAZE00000001CDS6788051767880618-
GWHAAZE00000001CDS6787826567878360-
GWHAAZE00000001three_prime_UTR6787768867878264-
Transcript Sequence

Network for GWHGAAZE002048

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0177Protein Kinases CMGC_GSK family Protein Kinases CMGC_GSK
GO:0030131 clathrin adaptor complex GOslim:cellular_component
GO:0030117 membrane coat GOslim:cellular_component
GO:0030276 clathrin binding GOslim:molecular_function
GO:0016192 vesicle-mediated transport GOslim:biological_process
GO:0009058 biosynthetic process GOslim:biological_process
GO:0006886 intracellular protein transport GOslim:biological_process
GO:0015031 protein transport GOslim:biological_process
CFinderModule0288Protein Kinases CMGC_GSK family Protein Kinases CMGC_GSK
GO:0004818 glutamate-tRNA ligase activity GOslim:molecular_function
GO:0006424 glutamyl-tRNA aminoacylation GOslim:biological_process
GO:0043039 tRNA aminoacylation GOslim:biological_process
GO:0005737 cytoplasm GOslim:cellular_component
GO:0006418 tRNA aminoacylation for protein translation GOslim:biological_process
GO:0009058 biosynthetic process GOslim:biological_process
GO:0030170 pyridoxal phosphate binding GOslim:molecular_function
GO:0004812 aminoacyl-tRNA ligase activity GOslim:molecular_function


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase743581.30E-63
PF00155.22Aminotran_1_2113602.40E-65
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCMGC_GSK

KEGG pathway

KO Enzyme pathway mapID
K23977GTK Metabolic pathways map01100
Cysteine and methionine metabolismmap00270
Plant hormone signal transductionmap04075

Gene Ontology

GO term OntologyName
GO:0009058biological_processbiosynthetic process
GO:0006468biological_processprotein phosphorylation
GO:0003824molecular_functioncatalytic activity
GO:0030170molecular_functionpyridoxal phosphate binding
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf61.762
SRR3591706second leaf35.977
SRR3591707mature leaf36.619
SRR3591708Shoot apex48.691
SRR3591709Stem45.386
SRR3591710White floral bud45.918
SRR3591711White flower44.793
SRR3591712Green floral bud52.142
SRR3591713Yellow flower43.128
SRP173429 SRR8316895Juvenile bud stage 33.014
SRR8316896Juvenile bud stage 44.522
SRR8316897Juvenile bud stage 22.266
SRR8316894Third green stage 21.301
SRR8316900Third green stage 61.474
SRR8316901Third green stage 53.681
SRR8316898Complete white stage 26.551
SRR8316899Complete white stage 85.757
SRR8316903Complete white stage 38.421
SRR8316902Silver flowering stage23.425
SRR8316904Silver flowering stage32.768
SRR8316905Silver flowering stage18.914
SRR8316906Gold flowering stage 57.834
SRR8316907Gold flowering stage 49.027
SRR8316908Gold flowering stage 59.238
SRP132670SRR6706286Control51.752
SRR6706287Light intensity 50%55.737
SRR6706288Light intensity 20%61.269
CNP0000432CNS0095592Slightly white alabastrum(diploid) 142.286
CNS0095593Slightly white alabastrum(diploid) 244.400
CNS0095594Slightly white alabastrum(diploid) 342.072
CNS0095595Whole white alabastrum(diploid) 234.708
CNS0095596Whole white alabastrum(diploid) 330.955
CNS0095597Whole white alabastrum(diploid) 434.723
CNS0095598Silvery flower (diploied) 141.705
CNS0095599Silvery flower (diploied) 238.744
CNS0095600Silvery flower (diploied) 366.705
CNS0095601Golden flower (diploid) 136.424
CNS0095602Golden flower (diploid) 266.896
CNS0095603Golden flower (diploid) 361.122
CNS0095604Slightly white alabastrum(tetraploid) 143.609
CNS0095605Slightly white alabastrum(tetraploid) 239.702
CNS0095606Slightly white alabastrum(tetraploid) 377.429
CNS0095607Whole white alabastrum(tetraploid) 126.583
CNS0095608Whole white alabastrum(tetraploid) 228.280
CNS0095609Whole white alabastrum(tetraploid) 350.219
CNS0095610Silvery flower (tetraploid) 161.001
CNS0095611Silvery flower (tetraploid) 270.411
CNS0095612Silvery flower (tetraploid) 358.540
CNS0095613Golden flower (tetraploid) 139.084
CNS0095614Golden flower (tetraploid) 251.337
CNS0095615Golden flower (tetraploid) 339.888
CRA001975CRR073297Stem 158.542
CRR073298Stem 264.072
CRR073299Stem 366.947
CRR073300Leaf 175.116
CRR073301Leaf 265.484
CRR073302Leaf 371.017
CRR073303Juvenile bud 181.751
CRR073304Juvenile bud 260.875
CRR073305Juvenile bud 387.254
CRR073306Third green 147.486
CRR073307Third green 241.579
CRR073308Third green 344.856
CRR073309Second white 140.062
CRR073310Second white 238.499
CRR073311Second white 329.473
CRR073312Silver flowering 127.191
CRR073313Silver flowering 226.084
CRR073314Silver flowering 318.715
CRR073315Gold flowering 135.788
CRR073316Gold flowering 239.675
CRR073317Gold flowering 335.144
CRR073318Tawny withering 169.626
CRR073319Tawny withering 251.360
CRR073320Tawny withering 372.971