Detail information of GWHGAAZE002046


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU30767.10hypothetical protein MIMGU_mgv1a006861mg [Erythranthe guttata]
COGYP_001100500.14E-92aromatic amino acid aminotransferase
Swissprottr|P46643|AAT1_ARATH0Aspartate aminotransferase, mitochondrial (Precursor)
trEMBLtr|A0A022QPY9|A0A022QPY9_ERYGU0Aspartate aminotransferase {ECO:0000256|RuleBase:RU000480}
TAIR10AT2G30970.21E-177aspartate aminotransferase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene6780898767815156+
GWHAAZE00000001mRNA6780898767815156+
GWHAAZE00000001exon6780898767809180+
GWHAAZE00000001exon6780961767809722+
GWHAAZE00000001exon6780986767809971+
GWHAAZE00000001exon6781005167810223+
GWHAAZE00000001exon6781074567810904+
GWHAAZE00000001exon6781411667814211+
GWHAAZE00000001exon6781433767814431+
GWHAAZE00000001exon6781483367815156+
GWHAAZE00000001CDS6780898767809180+
GWHAAZE00000001CDS6780961767809722+
GWHAAZE00000001CDS6780986767809971+
GWHAAZE00000001CDS6781005167810223+
GWHAAZE00000001CDS6781074567810904+
GWHAAZE00000001CDS6781411667814211+
GWHAAZE00000001CDS6781433767814431+
GWHAAZE00000001CDS6781483367814905+
GWHAAZE00000001three_prime_UTR6781490667815156+
Transcript Sequence

Network for GWHGAAZE002046

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0219map01200 Carbon metabolism
map04146 Peroxisome
map01210 2-Oxocarboxylic acid metabolism
map04146 Peroxisome
GO:0006102 isocitrate metabolic process GOslim:biological_process
GO:0006635 fatty acid beta-oxidation GOslim:biological_process
GO:0051499 D-aminoacyl-tRNA deacylase activity GOslim:molecular_function
GO:0003997 acyl-CoA oxidase activity GOslim:molecular_function
GO:0004450 isocitrate dehydrogenase (NADP+) activity GOslim:molecular_function
GO:0006631 fatty acid metabolic process GOslim:biological_process
map01230 Biosynthesis of amino acids
map01110 Biosynthesis of secondary metabolites
GO:0006520 cellular amino acid metabolic process GOslim:biological_process
map04975 Fat digestion and absorption
map01120 Microbial metabolism in diverse environments
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors GOslim:molecular_function
GO:0008483 transaminase activity GOslim:molecular_function
GO:0009058 biosynthetic process GOslim:biological_process
GO:0055114 oxidation-reduction process GOslim:biological_process
map00720 Carbon fixation pathways in prokaryotes
map00220 Arginine biosynthesis
map00950 Isoquinoline alkaloid biosynthesis
map00960 Tropane, piperidine and pyridine alkaloid biosynthesis
map01040 Biosynthesis of unsaturated fatty acids
map01100 Metabolic pathways
map03320 PPAR signaling pathway
map00360 Phenylalanine metabolism
map00330 Arginine and proline metabolism
map00640 Propanoate metabolism
map00020 Citrate cycle
map00350 Tyrosine metabolism
map00710 Carbon fixation in photosynthetic organisms
map04024 cAMP signaling pathway
map00250 Alanine, aspartate and glutamate metabolism
map00400 Phenylalanine, tyrosine and tryptophan biosynthesis
map00071 Fatty acid degradation
map01212 Fatty acid metabolism
map00410 beta-Alanine metabolism
GO:0051287 NAD binding GOslim:molecular_function
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GOslim:molecular_function
map00592 alpha-Linolenic acid metabolism


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00155.22Aminotran_1_253265.40E-78
PF13881.7Rad60-SLD_251167.70E-43
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14455GOT2 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
2-Oxocarboxylic acid metabolismmap01210
Biosynthesis of amino acidsmap01230
Carbon fixation in photosynthetic organismsmap00710
Alanine, aspartate and glutamate metabolismmap00250
Cysteine and methionine metabolismmap00270
Arginine biosynthesismap00220
Arginine and proline metabolismmap00330
Tyrosine metabolismmap00350
Phenylalanine metabolismmap00360
Phenylalanine, tyrosine and tryptophan biosynthesismap00400
Isoquinoline alkaloid biosynthesismap00950
Tropane, piperidine and pyridine alkaloid biosynthesismap00960
Fat digestion and absorptionmap04975

Gene Ontology

GO term OntologyName
GO:0009058biological_processbiosynthetic process
GO:0006520biological_processcellular amino acid metabolic process
GO:0003824molecular_functioncatalytic activity
GO:0030170molecular_functionpyridoxal phosphate binding
GO:0008483molecular_functiontransaminase activity
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf46.245
SRR3591706second leaf56.217
SRR3591707mature leaf30.605
SRR3591708Shoot apex27.442
SRR3591709Stem29.692
SRR3591710White floral bud42.630
SRR3591711White flower86.208
SRR3591712Green floral bud63.081
SRR3591713Yellow flower137.488
SRP173429 SRR8316895Juvenile bud stage 21.182
SRR8316896Juvenile bud stage 29.810
SRR8316897Juvenile bud stage 14.825
SRR8316894Third green stage 16.501
SRR8316900Third green stage 86.986
SRR8316901Third green stage 62.320
SRR8316898Complete white stage 53.985
SRR8316899Complete white stage 72.333
SRR8316903Complete white stage 52.590
SRR8316902Silver flowering stage62.724
SRR8316904Silver flowering stage86.732
SRR8316905Silver flowering stage42.611
SRR8316906Gold flowering stage 214.468
SRR8316907Gold flowering stage 201.475
SRR8316908Gold flowering stage 171.092
SRP132670SRR6706286Control49.944
SRR6706287Light intensity 50%56.651
SRR6706288Light intensity 20%58.761
CNP0000432CNS0095592Slightly white alabastrum(diploid) 128.492
CNS0095593Slightly white alabastrum(diploid) 250.625
CNS0095594Slightly white alabastrum(diploid) 331.912
CNS0095595Whole white alabastrum(diploid) 242.586
CNS0095596Whole white alabastrum(diploid) 343.240
CNS0095597Whole white alabastrum(diploid) 442.235
CNS0095598Silvery flower (diploied) 149.292
CNS0095599Silvery flower (diploied) 263.222
CNS0095600Silvery flower (diploied) 3138.451
CNS0095601Golden flower (diploid) 161.471
CNS0095602Golden flower (diploid) 2158.357
CNS0095603Golden flower (diploid) 3151.450
CNS0095604Slightly white alabastrum(tetraploid) 136.732
CNS0095605Slightly white alabastrum(tetraploid) 233.461
CNS0095606Slightly white alabastrum(tetraploid) 353.007
CNS0095607Whole white alabastrum(tetraploid) 128.072
CNS0095608Whole white alabastrum(tetraploid) 232.413
CNS0095609Whole white alabastrum(tetraploid) 377.131
CNS0095610Silvery flower (tetraploid) 199.282
CNS0095611Silvery flower (tetraploid) 2111.920
CNS0095612Silvery flower (tetraploid) 3128.569
CNS0095613Golden flower (tetraploid) 1109.509
CNS0095614Golden flower (tetraploid) 2112.313
CNS0095615Golden flower (tetraploid) 347.683
CRA001975CRR073297Stem 126.993
CRR073298Stem 223.542
CRR073299Stem 325.762
CRR073300Leaf 153.941
CRR073301Leaf 247.637
CRR073302Leaf 359.010
CRR073303Juvenile bud 196.341
CRR073304Juvenile bud 2122.289
CRR073305Juvenile bud 377.985
CRR073306Third green 160.584
CRR073307Third green 246.803
CRR073308Third green 344.895
CRR073309Second white 1166.245
CRR073310Second white 2108.942
CRR073311Second white 3106.700
CRR073312Silver flowering 1127.954
CRR073313Silver flowering 2132.017
CRR073314Silver flowering 3129.012
CRR073315Gold flowering 112.721
CRR073316Gold flowering 29.700
CRR073317Gold flowering 39.575
CRR073318Tawny withering 120.913
CRR073319Tawny withering 230.060
CRR073320Tawny withering 315.078