Detail information of GWHGAAZE002015


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009601545.12.91697E-11PREDICTED: F-box/kelch-repeat protein At3g23880-like [Nicotiana tomentosiformis]
trEMBLtr|K4CY35|K4CY35_SOLLC2E-10Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc10g008580.1.1}
TAIR10AT3G06240.10.0002F-box family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene6717202167172275+
GWHAAZE00000001mRNA6717202167172275+
GWHAAZE00000001exon6717202167172275+
GWHAAZE00000001CDS6717202167172275+
Transcript Sequence

Network for GWHGAAZE002015

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05042.14Caleosin23869.90E-22
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K17991PXG Cutin, suberine and wax biosynthesis map00073

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.032
SRR3591706second leaf0.182
SRR3591707mature leaf0.314
SRR3591708Shoot apex1.901
SRR3591709Stem1.378
SRR3591710White floral bud0.388
SRR3591711White flower0.332
SRR3591712Green floral bud0.234
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 1.543
SRR8316896Juvenile bud stage 0.632
SRR8316897Juvenile bud stage 0.358
SRR8316894Third green stage 0.377
SRR8316900Third green stage 0.708
SRR8316901Third green stage 0.497
SRR8316898Complete white stage 0.169
SRR8316899Complete white stage 0.958
SRR8316903Complete white stage 0.460
SRR8316902Silver flowering stage0.072
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.098
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.366
SRP132670SRR6706286Control0.066
SRR6706287Light intensity 50%0.112
SRR6706288Light intensity 20%0.090
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.398
CNS0095593Slightly white alabastrum(diploid) 21.493
CNS0095594Slightly white alabastrum(diploid) 30.433
CNS0095595Whole white alabastrum(diploid) 20.487
CNS0095596Whole white alabastrum(diploid) 30.834
CNS0095597Whole white alabastrum(diploid) 41.796
CNS0095598Silvery flower (diploied) 10.685
CNS0095599Silvery flower (diploied) 20.527
CNS0095600Silvery flower (diploied) 30.241
CNS0095601Golden flower (diploid) 10.768
CNS0095602Golden flower (diploid) 20.515
CNS0095603Golden flower (diploid) 30.333
CNS0095604Slightly white alabastrum(tetraploid) 11.122
CNS0095605Slightly white alabastrum(tetraploid) 21.763
CNS0095606Slightly white alabastrum(tetraploid) 32.708
CNS0095607Whole white alabastrum(tetraploid) 11.020
CNS0095608Whole white alabastrum(tetraploid) 21.184
CNS0095609Whole white alabastrum(tetraploid) 31.381
CNS0095610Silvery flower (tetraploid) 10.619
CNS0095611Silvery flower (tetraploid) 21.323
CNS0095612Silvery flower (tetraploid) 30.511
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.802
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.554
CRR073298Stem 20.382
CRR073299Stem 30.146
CRR073300Leaf 10.095
CRR073301Leaf 20.234
CRR073302Leaf 30.759
CRR073303Juvenile bud 10.415
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.309
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.797