Detail information of GWHGAAZE001968


Functional Annotation

DatabaseOrthologsE valueAnnotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene6606140166061493-
GWHAAZE00000001mRNA6606140166061493-
GWHAAZE00000001exon6606140166061493-
GWHAAZE00000001CDS6606140166061493-
Transcript Sequence

Network for GWHGAAZE001968

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00011.22HSP20551588.30E-32
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13993HSP20 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.490
SRR3591706second leaf1.684
SRR3591707mature leaf2.575
SRR3591708Shoot apex3.623
SRR3591709Stem5.311
SRR3591710White floral bud3.340
SRR3591711White flower2.305
SRR3591712Green floral bud4.934
SRR3591713Yellow flower2.247
SRP173429 SRR8316895Juvenile bud stage 5.510
SRR8316896Juvenile bud stage 5.708
SRR8316897Juvenile bud stage 0.153
SRR8316894Third green stage 4.460
SRR8316900Third green stage 8.436
SRR8316901Third green stage 8.257
SRR8316898Complete white stage 3.888
SRR8316899Complete white stage 9.871
SRR8316903Complete white stage 4.909
SRR8316902Silver flowering stage1.001
SRR8316904Silver flowering stage1.834
SRR8316905Silver flowering stage0.920
SRR8316906Gold flowering stage 2.557
SRR8316907Gold flowering stage 1.120
SRR8316908Gold flowering stage 2.993
SRP132670SRR6706286Control4.542
SRR6706287Light intensity 50%4.660
SRR6706288Light intensity 20%3.783
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.169
CNS0095593Slightly white alabastrum(diploid) 25.581
CNS0095594Slightly white alabastrum(diploid) 317.448
CNS0095595Whole white alabastrum(diploid) 26.006
CNS0095596Whole white alabastrum(diploid) 311.144
CNS0095597Whole white alabastrum(diploid) 412.336
CNS0095598Silvery flower (diploied) 19.643
CNS0095599Silvery flower (diploied) 28.270
CNS0095600Silvery flower (diploied) 39.530
CNS0095601Golden flower (diploid) 19.804
CNS0095602Golden flower (diploid) 27.293
CNS0095603Golden flower (diploid) 36.305
CNS0095604Slightly white alabastrum(tetraploid) 111.017
CNS0095605Slightly white alabastrum(tetraploid) 210.988
CNS0095606Slightly white alabastrum(tetraploid) 315.179
CNS0095607Whole white alabastrum(tetraploid) 110.524
CNS0095608Whole white alabastrum(tetraploid) 28.366
CNS0095609Whole white alabastrum(tetraploid) 311.538
CNS0095610Silvery flower (tetraploid) 17.453
CNS0095611Silvery flower (tetraploid) 210.382
CNS0095612Silvery flower (tetraploid) 36.296
CNS0095613Golden flower (tetraploid) 18.122
CNS0095614Golden flower (tetraploid) 26.027
CNS0095615Golden flower (tetraploid) 35.427
CRA001975CRR073297Stem 16.462
CRR073298Stem 29.736
CRR073299Stem 34.929
CRR073300Leaf 15.438
CRR073301Leaf 25.960
CRR073302Leaf 31.675
CRR073303Juvenile bud 14.224
CRR073304Juvenile bud 23.374
CRR073305Juvenile bud 35.369
CRR073306Third green 10.300
CRR073307Third green 20.529
CRR073308Third green 30.687
CRR073309Second white 11.608
CRR073310Second white 20.520
CRR073311Second white 30.050
CRR073312Silver flowering 10.285
CRR073313Silver flowering 20.798
CRR073314Silver flowering 30.149
CRR073315Gold flowering 13.029
CRR073316Gold flowering 24.671
CRR073317Gold flowering 32.247
CRR073318Tawny withering 14.370
CRR073319Tawny withering 25.545
CRR073320Tawny withering 35.031