Detail information of GWHGAAZE001875


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010092744.17.5369E-175Secologanin synthase [Morus notabilis]
COGYP_003706560.15E-44cytochrome P450
Swissprottr|H2DH21|C7A29_PANGI2E-170Cytochrome P450 CYP72A219
trEMBLtr|W9QRQ5|W9QRQ5_9ROSA3E-175Secologanin synthase {ECO:0000313|EMBL:EXB52089.1}
TAIR10AT3G14690.18E-124cytochrome P450, family 72, subfamily A, polypeptide 15

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene6357249563574075-
GWHAAZE00000001mRNA6357249563574075-
GWHAAZE00000001exon6357382863574075-
GWHAAZE00000001exon6357322863573612-
GWHAAZE00000001exon6357249563572920-
GWHAAZE00000001CDS6357382863574075-
GWHAAZE00000001CDS6357322863573612-
GWHAAZE00000001CDS6357249563572920-
Transcript Sequence

Network for GWHGAAZE001875

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00067.23p450113287.50E-71
PF13249.7SQHop_cyclase_N421994.60E-34
PF13243.7SQHop_cyclase_C5056324.40E-20
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K15813LUP4 Biosynthesis of secondary metabolites map01110
Sesquiterpenoid and triterpenoid biosynthesismap00909

Gene Ontology

GO term OntologyName
GO:0016104biological_processtriterpenoid biosynthetic process
GO:0055114biological_processoxidation-reduction process
GO:0005811cellular_componentlipid droplet
GO:0000250molecular_functionlanosterol synthase activity
GO:0016866molecular_functionintramolecular transferase activity
GO:0042300molecular_functionbeta-amyrin synthase activity
GO:0005506molecular_functioniron ion binding
GO:0016705molecular_functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037molecular_functionheme binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf20.297
SRR3591706second leaf5.489
SRR3591707mature leaf7.711
SRR3591708Shoot apex6.102
SRR3591709Stem29.828
SRR3591710White floral bud11.967
SRR3591711White flower11.640
SRR3591712Green floral bud12.238
SRR3591713Yellow flower1.852
SRP173429 SRR8316895Juvenile bud stage 2.257
SRR8316896Juvenile bud stage 1.801
SRR8316897Juvenile bud stage 0.203
SRR8316894Third green stage 0.642
SRR8316900Third green stage 1.661
SRR8316901Third green stage 0.854
SRR8316898Complete white stage 1.238
SRR8316899Complete white stage 6.009
SRR8316903Complete white stage 1.948
SRR8316902Silver flowering stage0.708
SRR8316904Silver flowering stage1.769
SRR8316905Silver flowering stage0.497
SRR8316906Gold flowering stage 0.900
SRR8316907Gold flowering stage 0.537
SRR8316908Gold flowering stage 0.336
SRP132670SRR6706286Control1.651
SRR6706287Light intensity 50%1.822
SRR6706288Light intensity 20%1.664
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.650
CNS0095593Slightly white alabastrum(diploid) 22.043
CNS0095594Slightly white alabastrum(diploid) 31.616
CNS0095595Whole white alabastrum(diploid) 22.106
CNS0095596Whole white alabastrum(diploid) 31.270
CNS0095597Whole white alabastrum(diploid) 41.383
CNS0095598Silvery flower (diploied) 13.075
CNS0095599Silvery flower (diploied) 27.022
CNS0095600Silvery flower (diploied) 32.314
CNS0095601Golden flower (diploid) 13.241
CNS0095602Golden flower (diploid) 22.934
CNS0095603Golden flower (diploid) 32.405
CNS0095604Slightly white alabastrum(tetraploid) 12.817
CNS0095605Slightly white alabastrum(tetraploid) 22.497
CNS0095606Slightly white alabastrum(tetraploid) 33.485
CNS0095607Whole white alabastrum(tetraploid) 12.527
CNS0095608Whole white alabastrum(tetraploid) 20.808
CNS0095609Whole white alabastrum(tetraploid) 31.728
CNS0095610Silvery flower (tetraploid) 10.370
CNS0095611Silvery flower (tetraploid) 21.731
CNS0095612Silvery flower (tetraploid) 30.836
CNS0095613Golden flower (tetraploid) 10.007
CNS0095614Golden flower (tetraploid) 20.117
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 11.023
CRR073298Stem 20.906
CRR073299Stem 31.704
CRR073300Leaf 11.559
CRR073301Leaf 20.754
CRR073302Leaf 30.574
CRR073303Juvenile bud 10.789
CRR073304Juvenile bud 20.296
CRR073305Juvenile bud 31.774
CRR073306Third green 10.605
CRR073307Third green 20.341
CRR073308Third green 30.829
CRR073309Second white 10.502
CRR073310Second white 20.206
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.095
CRR073314Silver flowering 30.000
CRR073315Gold flowering 11.761
CRR073316Gold flowering 23.490
CRR073317Gold flowering 31.289
CRR073318Tawny withering 18.825
CRR073319Tawny withering 28.443
CRR073320Tawny withering 314.368