Detail information of GWHGAAZE001838


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011082926.15.6675E-162PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 24-like isoform X1 [Sesamum indicum]
COGYP_004105746.18E-13glycoside hydrolase family protein
Swissprottr|Q38857|XTH22_ARATH2E-132Xyloglucan endotransglucosylase/hydrolase protein 22 (Precursor)
trEMBLtr|B9H805|B9H805_POPTR8E-156Xyloglucan endotransglucosylase/hydrolase {ECO:0000256|RuleBase:RU361120}
TAIR10AT5G57560.12E-100Xyloglucan endotransglucosylase/hydrolase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene6232241462323527-
GWHAAZE00000001mRNA6232241462323527-
GWHAAZE00000001exon6232241462322816-
GWHAAZE00000001exon6232293862323131-
GWHAAZE00000001exon6232324962323527-
GWHAAZE00000001CDS6232324962323527-
GWHAAZE00000001CDS6232293862323131-
GWHAAZE00000001CDS6232241462322816-
Transcript Sequence

Network for GWHGAAZE001838

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00722.22Glyco_hydro_16312102.70E-57
PF06955.13XET_C2432868.10E-19
PF00378.21ECH_1182734.40E-46
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K12663ECH1 Peroxisome map04146

Gene Ontology

GO term OntologyName
GO:0006073biological_processcellular glucan metabolic process
GO:0005975biological_processcarbohydrate metabolic process
GO:0010411biological_processxyloglucan metabolic process
GO:0042546biological_processcell wall biogenesis
GO:0005618cellular_componentcell wall
GO:0048046cellular_componentapoplast
GO:0003824molecular_functioncatalytic activity
GO:0016762molecular_functionxyloglucan:xyloglucosyl transferase activity
GO:0004553molecular_functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf11.827
SRR3591706second leaf0.108
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.745
SRR3591709Stem10.567
SRR3591710White floral bud0.427
SRR3591711White flower1.670
SRR3591712Green floral bud0.281
SRR3591713Yellow flower0.684
SRP173429 SRR8316895Juvenile bud stage 1.616
SRR8316896Juvenile bud stage 0.447
SRR8316897Juvenile bud stage 12.068
SRR8316894Third green stage 1.101
SRR8316900Third green stage 1.744
SRR8316901Third green stage 3.813
SRR8316898Complete white stage 0.049
SRR8316899Complete white stage 3.086
SRR8316903Complete white stage 0.119
SRR8316902Silver flowering stage0.683
SRR8316904Silver flowering stage0.104
SRR8316905Silver flowering stage0.324
SRR8316906Gold flowering stage 0.143
SRR8316907Gold flowering stage 1.073
SRR8316908Gold flowering stage 6.725
SRP132670SRR6706286Control0.347
SRR6706287Light intensity 50%1.267
SRR6706288Light intensity 20%0.521
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.381
CNS0095593Slightly white alabastrum(diploid) 23.990
CNS0095594Slightly white alabastrum(diploid) 32.106
CNS0095595Whole white alabastrum(diploid) 21.720
CNS0095596Whole white alabastrum(diploid) 30.647
CNS0095597Whole white alabastrum(diploid) 40.524
CNS0095598Silvery flower (diploied) 18.606
CNS0095599Silvery flower (diploied) 25.346
CNS0095600Silvery flower (diploied) 33.298
CNS0095601Golden flower (diploid) 17.692
CNS0095602Golden flower (diploid) 22.247
CNS0095603Golden flower (diploid) 31.393
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.008
CNS0095607Whole white alabastrum(tetraploid) 10.015
CNS0095608Whole white alabastrum(tetraploid) 20.036
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.062
CNS0095611Silvery flower (tetraploid) 20.044
CNS0095612Silvery flower (tetraploid) 30.179
CNS0095613Golden flower (tetraploid) 10.282
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.038
CRA001975CRR073297Stem 10.555
CRR073298Stem 20.782
CRR073299Stem 32.587
CRR073300Leaf 11.214
CRR073301Leaf 23.374
CRR073302Leaf 30.780
CRR073303Juvenile bud 11.978
CRR073304Juvenile bud 21.538
CRR073305Juvenile bud 34.264
CRR073306Third green 11.743
CRR073307Third green 24.104
CRR073308Third green 32.154
CRR073309Second white 10.417
CRR073310Second white 20.530
CRR073311Second white 30.695
CRR073312Silver flowering 11.441
CRR073313Silver flowering 20.694
CRR073314Silver flowering 30.492
CRR073315Gold flowering 12.526
CRR073316Gold flowering 29.724
CRR073317Gold flowering 31.237
CRR073318Tawny withering 11.497
CRR073319Tawny withering 26.611
CRR073320Tawny withering 32.499