Detail information of GWHGAAZE001687


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011098049.13.25547E-15PREDICTED: F-box protein At3g07870-like [Sesamum indicum]
trEMBLtr|K4CEY2|K4CEY2_SOLLC2E-14Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc07g047760.1.1}
TAIR10AT3G07870.10.01F-box and associated interaction domains-containing protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene5780384157804164+
GWHAAZE00000001mRNA5780384157804164+
GWHAAZE00000001exon5780384157804164+
GWHAAZE00000001CDS5780384157804164+
Transcript Sequence

Network for GWHGAAZE001687

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF17135.5Ribosomal_L1811851.80E-90
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K02883RP-L18e, RPL18 Ribosome map03010

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.318
SRR3591706second leaf2.015
SRR3591707mature leaf2.860
SRR3591708Shoot apex2.646
SRR3591709Stem1.296
SRR3591710White floral bud2.711
SRR3591711White flower0.552
SRR3591712Green floral bud1.983
SRR3591713Yellow flower0.239
SRP173429 SRR8316895Juvenile bud stage 2.278
SRR8316896Juvenile bud stage 2.477
SRR8316897Juvenile bud stage 0.306
SRR8316894Third green stage 1.370
SRR8316900Third green stage 2.023
SRR8316901Third green stage 5.504
SRR8316898Complete white stage 0.347
SRR8316899Complete white stage 5.510
SRR8316903Complete white stage 2.205
SRR8316902Silver flowering stage1.094
SRR8316904Silver flowering stage1.268
SRR8316905Silver flowering stage0.438
SRR8316906Gold flowering stage 0.734
SRR8316907Gold flowering stage 1.812
SRR8316908Gold flowering stage 1.540
SRP132670SRR6706286Control0.135
SRR6706287Light intensity 50%0.621
SRR6706288Light intensity 20%0.444
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.443
CNS0095593Slightly white alabastrum(diploid) 21.965
CNS0095594Slightly white alabastrum(diploid) 31.397
CNS0095595Whole white alabastrum(diploid) 21.659
CNS0095596Whole white alabastrum(diploid) 32.495
CNS0095597Whole white alabastrum(diploid) 42.734
CNS0095598Silvery flower (diploied) 13.855
CNS0095599Silvery flower (diploied) 20.971
CNS0095600Silvery flower (diploied) 31.350
CNS0095601Golden flower (diploid) 11.850
CNS0095602Golden flower (diploid) 22.558
CNS0095603Golden flower (diploid) 32.173
CNS0095604Slightly white alabastrum(tetraploid) 13.262
CNS0095605Slightly white alabastrum(tetraploid) 23.738
CNS0095606Slightly white alabastrum(tetraploid) 36.093
CNS0095607Whole white alabastrum(tetraploid) 11.468
CNS0095608Whole white alabastrum(tetraploid) 24.817
CNS0095609Whole white alabastrum(tetraploid) 33.978
CNS0095610Silvery flower (tetraploid) 12.979
CNS0095611Silvery flower (tetraploid) 22.684
CNS0095612Silvery flower (tetraploid) 34.439
CNS0095613Golden flower (tetraploid) 11.939
CNS0095614Golden flower (tetraploid) 22.943
CNS0095615Golden flower (tetraploid) 32.505
CRA001975CRR073297Stem 11.103
CRR073298Stem 21.005
CRR073299Stem 31.822
CRR073300Leaf 12.323
CRR073301Leaf 21.556
CRR073302Leaf 30.201
CRR073303Juvenile bud 12.779
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.897
CRR073306Third green 10.074
CRR073307Third green 20.099
CRR073308Third green 30.202
CRR073309Second white 10.522
CRR073310Second white 20.556
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 12.676
CRR073316Gold flowering 22.267
CRR073317Gold flowering 30.591
CRR073318Tawny withering 11.031
CRR073319Tawny withering 21.090
CRR073320Tawny withering 30.000