Detail information of GWHGAAZE001658


Functional Annotation

DatabaseOrthologsE valueAnnotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene5692795856928598-
GWHAAZE00000001mRNA5692795856928598-
GWHAAZE00000001exon5692840656928598-
GWHAAZE00000001exon5692795856928252-
GWHAAZE00000001five_prime_UTR5692840656928598-
GWHAAZE00000001five_prime_UTR5692816856928252-
GWHAAZE00000001CDS5692795856928167-
Transcript Sequence

Network for GWHGAAZE001658

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03473.18MOSC1753171.10E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15631ABA3 Folate biosynthesis map00790

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity
GO:0030151molecular_functionmolybdenum ion binding
GO:0030170molecular_functionpyridoxal phosphate binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.802
SRR3591706second leaf2.958
SRR3591707mature leaf2.357
SRR3591708Shoot apex2.520
SRR3591709Stem1.534
SRR3591710White floral bud3.087
SRR3591711White flower3.367
SRR3591712Green floral bud2.633
SRR3591713Yellow flower0.937
SRP173429 SRR8316895Juvenile bud stage 2.752
SRR8316896Juvenile bud stage 5.351
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 1.832
SRR8316900Third green stage 3.509
SRR8316901Third green stage 3.489
SRR8316898Complete white stage 0.479
SRR8316899Complete white stage 5.285
SRR8316903Complete white stage 1.659
SRR8316902Silver flowering stage0.799
SRR8316904Silver flowering stage0.894
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.106
SRR8316907Gold flowering stage 0.177
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.385
SRR6706287Light intensity 50%1.060
SRR6706288Light intensity 20%1.391
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.542
CNS0095593Slightly white alabastrum(diploid) 24.577
CNS0095594Slightly white alabastrum(diploid) 35.730
CNS0095595Whole white alabastrum(diploid) 22.367
CNS0095596Whole white alabastrum(diploid) 32.629
CNS0095597Whole white alabastrum(diploid) 42.859
CNS0095598Silvery flower (diploied) 13.319
CNS0095599Silvery flower (diploied) 22.632
CNS0095600Silvery flower (diploied) 31.401
CNS0095601Golden flower (diploid) 13.367
CNS0095602Golden flower (diploid) 20.538
CNS0095603Golden flower (diploid) 31.459
CNS0095604Slightly white alabastrum(tetraploid) 12.773
CNS0095605Slightly white alabastrum(tetraploid) 22.355
CNS0095606Slightly white alabastrum(tetraploid) 33.204
CNS0095607Whole white alabastrum(tetraploid) 10.673
CNS0095608Whole white alabastrum(tetraploid) 21.122
CNS0095609Whole white alabastrum(tetraploid) 32.044
CNS0095610Silvery flower (tetraploid) 11.269
CNS0095611Silvery flower (tetraploid) 21.460
CNS0095612Silvery flower (tetraploid) 31.446
CNS0095613Golden flower (tetraploid) 10.716
CNS0095614Golden flower (tetraploid) 21.103
CNS0095615Golden flower (tetraploid) 30.445
CRA001975CRR073297Stem 12.940
CRR073298Stem 21.195
CRR073299Stem 30.526
CRR073300Leaf 10.794
CRR073301Leaf 21.204
CRR073302Leaf 30.393
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.360
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.508
CRR073316Gold flowering 20.266
CRR073317Gold flowering 30.034
CRR073318Tawny withering 10.807
CRR073319Tawny withering 20.368
CRR073320Tawny withering 30.927