Detail information of GWHGAAZE001646


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011076712.11.11301E-11PREDICTED: F-box/FBD/LRR-repeat protein At5g53840-like isoform X2 [Sesamum indicum]
trEMBLtr|A0A067KLZ8|A0A067KLZ8_JATCU2E-10Uncharacterized protein {ECO:0000313|EMBL:KDP32824.1}
TAIR10AT1G61320.10.002FBD / Leucine Rich Repeat domains containing protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene5556899955572382+
GWHAAZE00000001mRNA5556899955572382+
GWHAAZE00000001exon5556899955569235+
GWHAAZE00000001exon5557210155572382+
GWHAAZE00000001CDS5556899955569235+
GWHAAZE00000001CDS5557210155572382+
Transcript Sequence

Network for GWHGAAZE001646

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08387.11FBD1011359.60E-05
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K02575NRT, narK, nrtP, nasA Nitrogen metabolism map00910

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.000
SRR3591711White flower0.000
SRR3591712Green floral bud0.000
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.000
SRR8316896Juvenile bud stage 0.000
SRR8316897Juvenile bud stage 0.578
SRR8316894Third green stage 0.089
SRR8316900Third green stage 0.761
SRR8316901Third green stage 0.495
SRR8316898Complete white stage 0.270
SRR8316899Complete white stage 0.184
SRR8316903Complete white stage 0.219
SRR8316902Silver flowering stage0.463
SRR8316904Silver flowering stage0.295
SRR8316905Silver flowering stage0.102
SRR8316906Gold flowering stage 0.684
SRR8316907Gold flowering stage 0.856
SRR8316908Gold flowering stage 0.792
SRP132670SRR6706286Control0.219
SRR6706287Light intensity 50%0.468
SRR6706288Light intensity 20%0.292
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.160
CNS0095593Slightly white alabastrum(diploid) 20.781
CNS0095594Slightly white alabastrum(diploid) 31.122
CNS0095595Whole white alabastrum(diploid) 23.528
CNS0095596Whole white alabastrum(diploid) 32.395
CNS0095597Whole white alabastrum(diploid) 41.743
CNS0095598Silvery flower (diploied) 10.272
CNS0095599Silvery flower (diploied) 20.258
CNS0095600Silvery flower (diploied) 30.132
CNS0095601Golden flower (diploid) 10.004
CNS0095602Golden flower (diploid) 20.434
CNS0095603Golden flower (diploid) 30.264
CNS0095604Slightly white alabastrum(tetraploid) 10.916
CNS0095605Slightly white alabastrum(tetraploid) 20.861
CNS0095606Slightly white alabastrum(tetraploid) 30.492
CNS0095607Whole white alabastrum(tetraploid) 10.839
CNS0095608Whole white alabastrum(tetraploid) 21.791
CNS0095609Whole white alabastrum(tetraploid) 30.468
CNS0095610Silvery flower (tetraploid) 10.868
CNS0095611Silvery flower (tetraploid) 20.379
CNS0095612Silvery flower (tetraploid) 30.751
CNS0095613Golden flower (tetraploid) 10.789
CNS0095614Golden flower (tetraploid) 20.251
CNS0095615Golden flower (tetraploid) 30.515
CRA001975CRR073297Stem 10.234
CRR073298Stem 20.109
CRR073299Stem 30.126
CRR073300Leaf 10.574
CRR073301Leaf 20.805
CRR073302Leaf 30.094
CRR073303Juvenile bud 10.063
CRR073304Juvenile bud 20.329
CRR073305Juvenile bud 30.098
CRR073306Third green 10.152
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.064
CRR073310Second white 20.220
CRR073311Second white 30.513
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.221
CRR073314Silver flowering 30.195
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.091
CRR073319Tawny withering 20.288
CRR073320Tawny withering 30.000