Gene detail

Detail information of GWHGAAZE001374

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009381664.1	9.6384E-111	PREDICTED: ADP,ATP carrier protein 1, mitochondrial-like [Musa acuminata subsp. malaccensis]
Swissprot	tr\|O22342\|ADT1_GOSHI	6E-109	ADP,ATP carrier protein 1, mitochondrial (Precursor)
trEMBL	tr\|M0RN31\|M0RN31_MUSAM	3E-110	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr10P31570_001}
TAIR10	AT3G08580.2	8E-83	ADP/ATP carrier 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	34587092	34590790	-
GWHAAZE00000001	mRNA	34587092	34590790	-
GWHAAZE00000001	exon	34590518	34590790	-
GWHAAZE00000001	exon	34588666	34589079	-
GWHAAZE00000001	exon	34587092	34587463	-
GWHAAZE00000001	CDS	34590518	34590790	-
GWHAAZE00000001	CDS	34588666	34589079	-
GWHAAZE00000001	CDS	34587092	34587463	-

Transcript Sequence
>GWHTAAZE001378 ATGCCGCCATCTGTACAAGGGAAATCTCCTTTATGGGACAGTTCCTTATGGCTATGGTATATCATGGGTGGAGTTGTGTCCAGAACTGCGGCTGCGCCACTCGGTCGCGTTAAACTTTTGCTCCAATGCCAAGGCGATATGATAAAGTCCGGCCGACTATCGGAACCCTACAAAGGCATTCAAGATTGTTTCAAAAGAGTAATTAGGGATGAAGGGTTCTTCTCGTTGTGGAGAGGCAATGTTCCTACTATCATTTCTTACGTTCCTAGTAAGATCTTGCCCATTGTCTTCAGTGTTTACTTCAAGTGGCTGTTCAATTACAAGAAAGATCGGGACGGTTACTGGAAATGGTTCTTCAGTAATGTGGCTTCTGGTGCAGCCAGTGGTGCTTTTTCCTCATTCTTTATCTACCCGTTGGATTACGCGCGAACTCGTCTTGCAAATGATATCATCATAGCTACTGCAAATAAAGGATCACAAAGACAGTTCAATGGCTTGATTGATGTGTACTGGAAAACTCTCATAACTGACGGCACTGCCGGTCTCTATCGTGGGTTCGCGGTTTGTTGTGTTCGCGTTATGGTGCATACCGGGTTGTCCTTTGGCCTTTATGAATCGTTGAAGCCTGTGGACCTTCCAAAAAAGTATGAGGTTAGTACCAGTAGTCTCATAGGAGCTTTCTTTATTAACTTGGATGATTTTTCATTTCGGAACAAGCCTTCGATGTTTGCTGTTGCTTTTCTTACTGCAAATGTGGCTTTTGCTGCGTCCTACCCATTTGGCACGGTCAGCAGAAGAATGATGATGACATCTGGTGAAGCTTACAAATACAAGAGTGCGATCGACGCGTTTTCTCAGATCCTGATGAACGAGGGTTTCAAATCGTTCTACAAAGGTTTCGGTGCGAGCTACCTTCATGTGATTGTTACTGCTGCGGCACTAGCGAATTATAAGAGGCTTCTTCATGCTTTTGGAAAGAGTAGTGATGGTAAAAGTGAGGTCTCAATTGCATTTAGAAGGAAGAATGCTGGCTCTGCTGGTGATTCAAATCCATTTTAG

Network for GWHGAAZE001374

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00153.28	Mito_carr	22	107	7.00E-15
PF00153.28	Mito_carr	115	209	1.40E-19
PF00153.28	Mito_carr	245	326	2.50E-10

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K05863	SLC25A4S, ANT	Calcium signaling pathway	map04020
		cGMP-PKG signaling pathway	map04022
		Necroptosis	map04217
		Cellular senescence	map04218

Gene Ontology

GO term	Ontology	Name
GO:0055085	biological_process	transmembrane transport
GO:0005743	cellular_component	mitochondrial inner membrane
GO:0022857	molecular_function	transmembrane transporter activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.806
	SRR3591706	second leaf	0.845
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	3.102
	SRR3591709	Stem	0.511
	SRR3591710	White floral bud	7.825
	SRR3591711	White flower	7.003
	SRR3591712	Green floral bud	14.736
	SRR3591713	Yellow flower	4.111
SRP173429	SRR8316895	Juvenile bud stage	14.618
	SRR8316896	Juvenile bud stage	28.982
	SRR8316897	Juvenile bud stage	12.268
	SRR8316894	Third green stage	10.223
	SRR8316900	Third green stage	25.128
	SRR8316901	Third green stage	25.603
	SRR8316898	Complete white stage	8.583
	SRR8316899	Complete white stage	16.885
	SRR8316903	Complete white stage	9.616
	SRR8316902	Silver flowering stage	5.846
	SRR8316904	Silver flowering stage	7.734
	SRR8316905	Silver flowering stage	3.482
	SRR8316906	Gold flowering stage	5.071
	SRR8316907	Gold flowering stage	5.992
	SRR8316908	Gold flowering stage	3.955
SRP132670	SRR6706286	Control	13.660
	SRR6706287	Light intensity 50%	12.652
	SRR6706288	Light intensity 20%	16.394
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	30.211
	CNS0095593	Slightly white alabastrum(diploid) 2	19.054
	CNS0095594	Slightly white alabastrum(diploid) 3	30.807
	CNS0095595	Whole white alabastrum(diploid) 2	21.435
	CNS0095596	Whole white alabastrum(diploid) 3	23.253
	CNS0095597	Whole white alabastrum(diploid) 4	19.891
	CNS0095598	Silvery flower (diploied) 1	3.694
	CNS0095599	Silvery flower (diploied) 2	9.431
	CNS0095600	Silvery flower (diploied) 3	11.805
	CNS0095601	Golden flower (diploid) 1	5.591
	CNS0095602	Golden flower (diploid) 2	6.001
	CNS0095603	Golden flower (diploid) 3	5.947
	CNS0095604	Slightly white alabastrum(tetraploid) 1	24.395
	CNS0095605	Slightly white alabastrum(tetraploid) 2	22.170
	CNS0095606	Slightly white alabastrum(tetraploid) 3	9.381
	CNS0095607	Whole white alabastrum(tetraploid) 1	19.017
	CNS0095608	Whole white alabastrum(tetraploid) 2	13.984
	CNS0095609	Whole white alabastrum(tetraploid) 3	16.025
	CNS0095610	Silvery flower (tetraploid) 1	3.676
	CNS0095611	Silvery flower (tetraploid) 2	2.184
	CNS0095612	Silvery flower (tetraploid) 3	4.235
	CNS0095613	Golden flower (tetraploid) 1	0.565
	CNS0095614	Golden flower (tetraploid) 2	0.738
	CNS0095615	Golden flower (tetraploid) 3	0.616
CRA001975	CRR073297	Stem 1	25.705
	CRR073298	Stem 2	24.921
	CRR073299	Stem 3	25.156
	CRR073300	Leaf 1	24.539
	CRR073301	Leaf 2	27.378
	CRR073302	Leaf 3	24.132
	CRR073303	Juvenile bud 1	20.038
	CRR073304	Juvenile bud 2	14.730
	CRR073305	Juvenile bud 3	16.758
	CRR073306	Third green 1	16.687
	CRR073307	Third green 2	15.688
	CRR073308	Third green 3	18.030
	CRR073309	Second white 1	6.216
	CRR073310	Second white 2	4.773
	CRR073311	Second white 3	3.081
	CRR073312	Silver flowering 1	2.855
	CRR073313	Silver flowering 2	1.896
	CRR073314	Silver flowering 3	1.802
	CRR073315	Gold flowering 1	3.766
	CRR073316	Gold flowering 2	3.474
	CRR073317	Gold flowering 3	4.075
	CRR073318	Tawny withering 1	4.838
	CRR073319	Tawny withering 2	2.186
	CRR073320	Tawny withering 3	3.957