Detail information of GWHGAAZE001341


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007015067.10Calcium-dependent protein kinase 19 isoform 1 [Theobroma cacao]
Swissprottr|Q42438|CDPK8_ARATH0Calcium-dependent protein kinase 8
trEMBLtr|A0A061GT93|A0A061GT93_THECC0Calcium-dependent protein kinase 19 isoform 1 {ECO:0000313|EMBL:EOY32686.1}
TAIR10AT5G19450.20calcium-dependent protein kinase 19

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene3290928632917535-
GWHAAZE00000001mRNA3290928632917535-
GWHAAZE00000001exon3290928632909441-
GWHAAZE00000001exon3291032932910559-
GWHAAZE00000001exon3291165332911820-
GWHAAZE00000001exon3291191532912030-
GWHAAZE00000001exon3291296832913120-
GWHAAZE00000001exon3291386132914004-
GWHAAZE00000001exon3291464332914766-
GWHAAZE00000001exon3291694032917324-
GWHAAZE00000001exon3291751032917535-
GWHAAZE00000001CDS3291751032917535-
GWHAAZE00000001CDS3291694032917324-
GWHAAZE00000001CDS3291464332914766-
GWHAAZE00000001CDS3291386132914004-
GWHAAZE00000001CDS3291296832913120-
GWHAAZE00000001CDS3291191532912030-
GWHAAZE00000001CDS3291165332911820-
GWHAAZE00000001CDS3291032932910559-
GWHAAZE00000001CDS3290928632909441-
Transcript Sequence

Network for GWHGAAZE001341

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase242828.30E-75
PF13499.7EF-hand_73303881.50E-08
PF13499.7EF-hand_73994622.50E-14
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
K13412CPK Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding
GO:0005509molecular_functioncalcium ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.836
SRR3591706second leaf11.555
SRR3591707mature leaf28.790
SRR3591708Shoot apex3.085
SRR3591709Stem5.814
SRR3591710White floral bud53.924
SRR3591711White flower14.968
SRR3591712Green floral bud35.391
SRR3591713Yellow flower3.083
SRP173429 SRR8316895Juvenile bud stage 1.164
SRR8316896Juvenile bud stage 1.914
SRR8316897Juvenile bud stage 1.603
SRR8316894Third green stage 3.012
SRR8316900Third green stage 19.164
SRR8316901Third green stage 16.883
SRR8316898Complete white stage 21.581
SRR8316899Complete white stage 44.542
SRR8316903Complete white stage 35.001
SRR8316902Silver flowering stage14.149
SRR8316904Silver flowering stage19.343
SRR8316905Silver flowering stage6.776
SRR8316906Gold flowering stage 7.336
SRR8316907Gold flowering stage 11.500
SRR8316908Gold flowering stage 11.560
SRP132670SRR6706286Control19.858
SRR6706287Light intensity 50%20.386
SRR6706288Light intensity 20%18.800
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.927
CNS0095593Slightly white alabastrum(diploid) 27.594
CNS0095594Slightly white alabastrum(diploid) 37.015
CNS0095595Whole white alabastrum(diploid) 217.616
CNS0095596Whole white alabastrum(diploid) 317.882
CNS0095597Whole white alabastrum(diploid) 425.594
CNS0095598Silvery flower (diploied) 11.778
CNS0095599Silvery flower (diploied) 23.837
CNS0095600Silvery flower (diploied) 36.299
CNS0095601Golden flower (diploid) 11.757
CNS0095602Golden flower (diploid) 21.873
CNS0095603Golden flower (diploid) 31.457
CNS0095604Slightly white alabastrum(tetraploid) 113.391
CNS0095605Slightly white alabastrum(tetraploid) 211.382
CNS0095606Slightly white alabastrum(tetraploid) 314.738
CNS0095607Whole white alabastrum(tetraploid) 125.686
CNS0095608Whole white alabastrum(tetraploid) 232.919
CNS0095609Whole white alabastrum(tetraploid) 324.179
CNS0095610Silvery flower (tetraploid) 122.037
CNS0095611Silvery flower (tetraploid) 25.442
CNS0095612Silvery flower (tetraploid) 313.096
CNS0095613Golden flower (tetraploid) 13.416
CNS0095614Golden flower (tetraploid) 24.240
CNS0095615Golden flower (tetraploid) 32.899
CRA001975CRR073297Stem 12.818
CRR073298Stem 23.361
CRR073299Stem 31.392
CRR073300Leaf 122.399
CRR073301Leaf 214.151
CRR073302Leaf 39.517
CRR073303Juvenile bud 126.806
CRR073304Juvenile bud 221.298
CRR073305Juvenile bud 317.973
CRR073306Third green 118.627
CRR073307Third green 219.102
CRR073308Third green 319.547
CRR073309Second white 13.271
CRR073310Second white 25.076
CRR073311Second white 34.310
CRR073312Silver flowering 13.237
CRR073313Silver flowering 22.024
CRR073314Silver flowering 32.948
CRR073315Gold flowering 13.967
CRR073316Gold flowering 27.729
CRR073317Gold flowering 33.330
CRR073318Tawny withering 15.250
CRR073319Tawny withering 28.302
CRR073320Tawny withering 34.810