Detail information of GWHGAAZE001339


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU46253.10hypothetical protein MIMGU_mgv1a004318mg [Erythranthe guttata]
Swissprottr|Q42438|CDPK8_ARATH0Calcium-dependent protein kinase 8
trEMBLtr|A0A022S2W5|A0A022S2W5_ERYGU0Uncharacterized protein {ECO:0000313|EMBL:EYU46253.1}
TAIR10AT5G19450.20calcium-dependent protein kinase 19

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene3280805032815908-
GWHAAZE00000001mRNA3280805032815908-
GWHAAZE00000001exon3280805032808205-
GWHAAZE00000001exon3280908232809312-
GWHAAZE00000001exon3281043032810597-
GWHAAZE00000001exon3281069232810807-
GWHAAZE00000001exon3281174832811900-
GWHAAZE00000001exon3281278832812931-
GWHAAZE00000001exon3281356432813687-
GWHAAZE00000001exon3281536632815908-
GWHAAZE00000001CDS3281536632815908-
GWHAAZE00000001CDS3281356432813687-
GWHAAZE00000001CDS3281278832812931-
GWHAAZE00000001CDS3281174832811900-
GWHAAZE00000001CDS3281069232810807-
GWHAAZE00000001CDS3281043032810597-
GWHAAZE00000001CDS3280908232809312-
GWHAAZE00000001CDS3280805032808205-
Transcript Sequence

Network for GWHGAAZE001339

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase683261.60E-77
PF13499.7EF-hand_73744321.70E-08
PF13499.7EF-hand_74435062.80E-14
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
K13412CPK Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0005509molecular_functioncalcium ion binding
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf11.396
SRR3591706second leaf13.983
SRR3591707mature leaf16.259
SRR3591708Shoot apex11.295
SRR3591709Stem14.232
SRR3591710White floral bud109.860
SRR3591711White flower25.554
SRR3591712Green floral bud45.544
SRR3591713Yellow flower28.469
SRP173429 SRR8316895Juvenile bud stage 10.297
SRR8316896Juvenile bud stage 15.547
SRR8316897Juvenile bud stage 6.628
SRR8316894Third green stage 7.973
SRR8316900Third green stage 29.377
SRR8316901Third green stage 28.409
SRR8316898Complete white stage 9.523
SRR8316899Complete white stage 30.667
SRR8316903Complete white stage 13.772
SRR8316902Silver flowering stage14.097
SRR8316904Silver flowering stage18.689
SRR8316905Silver flowering stage9.979
SRR8316906Gold flowering stage 38.875
SRR8316907Gold flowering stage 29.495
SRR8316908Gold flowering stage 50.789
SRP132670SRR6706286Control24.895
SRR6706287Light intensity 50%23.587
SRR6706288Light intensity 20%21.608
CNP0000432CNS0095592Slightly white alabastrum(diploid) 121.345
CNS0095593Slightly white alabastrum(diploid) 221.264
CNS0095594Slightly white alabastrum(diploid) 323.823
CNS0095595Whole white alabastrum(diploid) 251.330
CNS0095596Whole white alabastrum(diploid) 347.895
CNS0095597Whole white alabastrum(diploid) 470.656
CNS0095598Silvery flower (diploied) 116.301
CNS0095599Silvery flower (diploied) 223.749
CNS0095600Silvery flower (diploied) 320.779
CNS0095601Golden flower (diploid) 115.792
CNS0095602Golden flower (diploid) 219.455
CNS0095603Golden flower (diploid) 318.781
CNS0095604Slightly white alabastrum(tetraploid) 135.699
CNS0095605Slightly white alabastrum(tetraploid) 238.423
CNS0095606Slightly white alabastrum(tetraploid) 319.014
CNS0095607Whole white alabastrum(tetraploid) 175.878
CNS0095608Whole white alabastrum(tetraploid) 295.463
CNS0095609Whole white alabastrum(tetraploid) 344.880
CNS0095610Silvery flower (tetraploid) 130.202
CNS0095611Silvery flower (tetraploid) 228.975
CNS0095612Silvery flower (tetraploid) 330.793
CNS0095613Golden flower (tetraploid) 122.641
CNS0095614Golden flower (tetraploid) 224.721
CNS0095615Golden flower (tetraploid) 321.082
CRA001975CRR073297Stem 121.368
CRR073298Stem 218.685
CRR073299Stem 312.363
CRR073300Leaf 136.696
CRR073301Leaf 227.006
CRR073302Leaf 316.709
CRR073303Juvenile bud 134.347
CRR073304Juvenile bud 225.585
CRR073305Juvenile bud 317.113
CRR073306Third green 127.387
CRR073307Third green 218.982
CRR073308Third green 324.162
CRR073309Second white 15.427
CRR073310Second white 216.404
CRR073311Second white 39.411
CRR073312Silver flowering 119.861
CRR073313Silver flowering 213.694
CRR073314Silver flowering 314.364
CRR073315Gold flowering 116.562
CRR073316Gold flowering 212.928
CRR073317Gold flowering 37.193
CRR073318Tawny withering 130.890
CRR073319Tawny withering 235.197
CRR073320Tawny withering 326.405