Detail information of GWHGAAZE001243


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002279511.11.15939E-15PREDICTED: putative methyltransferase At1g22800 [Vitis vinifera]
Swissprottr|O80543|Y1280_ARATH5E-16Putative methyltransferase At1g22800
trEMBLtr|F6HN49|F6HN49_VITVI3E-16Putative uncharacterized protein {ECO:0000313|EMBL:CCB56104.1}
TAIR10AT1G22800.13E-13S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene2899308828993534+
GWHAAZE00000001mRNA2899308828993534+
GWHAAZE00000001exon2899308828993093+
GWHAAZE00000001exon2899340628993534+
GWHAAZE00000001CDS2899308828993093+
GWHAAZE00000001CDS2899340628993534+
Transcript Sequence

Network for GWHGAAZE001243

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K18162NDUFAF5 Thermogenesis map04714

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf6.790
SRR3591706second leaf8.990
SRR3591707mature leaf9.764
SRR3591708Shoot apex9.872
SRR3591709Stem6.620
SRR3591710White floral bud5.787
SRR3591711White flower6.595
SRR3591712Green floral bud8.515
SRR3591713Yellow flower5.082
SRP173429 SRR8316895Juvenile bud stage 3.102
SRR8316896Juvenile bud stage 7.451
SRR8316897Juvenile bud stage 1.102
SRR8316894Third green stage 1.970
SRR8316900Third green stage 9.620
SRR8316901Third green stage 8.766
SRR8316898Complete white stage 1.854
SRR8316899Complete white stage 5.500
SRR8316903Complete white stage 2.383
SRR8316902Silver flowering stage1.956
SRR8316904Silver flowering stage1.520
SRR8316905Silver flowering stage1.686
SRR8316906Gold flowering stage 4.365
SRR8316907Gold flowering stage 4.719
SRR8316908Gold flowering stage 1.707
SRP132670SRR6706286Control4.150
SRR6706287Light intensity 50%3.722
SRR6706288Light intensity 20%5.675
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.842
CNS0095593Slightly white alabastrum(diploid) 25.998
CNS0095594Slightly white alabastrum(diploid) 36.498
CNS0095595Whole white alabastrum(diploid) 211.057
CNS0095596Whole white alabastrum(diploid) 311.716
CNS0095597Whole white alabastrum(diploid) 49.112
CNS0095598Silvery flower (diploied) 12.504
CNS0095599Silvery flower (diploied) 24.967
CNS0095600Silvery flower (diploied) 31.307
CNS0095601Golden flower (diploid) 12.324
CNS0095602Golden flower (diploid) 25.224
CNS0095603Golden flower (diploid) 32.724
CNS0095604Slightly white alabastrum(tetraploid) 110.843
CNS0095605Slightly white alabastrum(tetraploid) 210.275
CNS0095606Slightly white alabastrum(tetraploid) 39.277
CNS0095607Whole white alabastrum(tetraploid) 16.111
CNS0095608Whole white alabastrum(tetraploid) 28.969
CNS0095609Whole white alabastrum(tetraploid) 36.300
CNS0095610Silvery flower (tetraploid) 15.197
CNS0095611Silvery flower (tetraploid) 25.266
CNS0095612Silvery flower (tetraploid) 33.727
CNS0095613Golden flower (tetraploid) 14.125
CNS0095614Golden flower (tetraploid) 27.893
CNS0095615Golden flower (tetraploid) 35.840
CRA001975CRR073297Stem 14.750
CRR073298Stem 24.439
CRR073299Stem 33.092
CRR073300Leaf 15.518
CRR073301Leaf 27.006
CRR073302Leaf 35.595
CRR073303Juvenile bud 15.471
CRR073304Juvenile bud 22.292
CRR073305Juvenile bud 32.458
CRR073306Third green 10.681
CRR073307Third green 21.364
CRR073308Third green 31.028
CRR073309Second white 11.205
CRR073310Second white 21.179
CRR073311Second white 30.733
CRR073312Silver flowering 10.164
CRR073313Silver flowering 20.000
CRR073314Silver flowering 31.091
CRR073315Gold flowering 12.885
CRR073316Gold flowering 24.327
CRR073317Gold flowering 31.213
CRR073318Tawny withering 12.608
CRR073319Tawny withering 22.015
CRR073320Tawny withering 30.869