Detail information of GWHGAAZE001142


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP27391.11.9111E-140hypothetical protein JCGZ_20215 [Jatropha curcas]
Swissprottr|Q9FMS6|CAF1K_ARATH3E-127Probable CCR4-associated factor 1 homolog 11
trEMBLtr|A0A067JTU3|A0A067JTU3_JATCU7E-141Uncharacterized protein {ECO:0000313|EMBL:KDP27391.1}
TAIR10AT5G22250.11E-101Polynucleotidyl transferase, ribonuclease H-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene2600281626003526+
GWHAAZE00000001mRNA2600281626003526+
GWHAAZE00000001exon2600281626003526+
GWHAAZE00000001CDS2600281626003526+
Transcript Sequence

Network for GWHGAAZE001142

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04857.21CAF111012.60E-06
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K12581CNOT7_8, CAF1, POP2 RNA degradation map03018

Gene Ontology

GO term OntologyName
GO:0003676molecular_functionnucleic acid binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf111.829
SRR3591706second leaf43.914
SRR3591707mature leaf38.430
SRR3591708Shoot apex49.459
SRR3591709Stem259.531
SRR3591710White floral bud195.305
SRR3591711White flower271.090
SRR3591712Green floral bud64.424
SRR3591713Yellow flower117.355
SRP173429 SRR8316895Juvenile bud stage 146.847
SRR8316896Juvenile bud stage 34.461
SRR8316897Juvenile bud stage 73.689
SRR8316894Third green stage 38.524
SRR8316900Third green stage 43.080
SRR8316901Third green stage 68.432
SRR8316898Complete white stage 4.930
SRR8316899Complete white stage 217.988
SRR8316903Complete white stage 9.519
SRR8316902Silver flowering stage16.119
SRR8316904Silver flowering stage7.200
SRR8316905Silver flowering stage8.502
SRR8316906Gold flowering stage 42.157
SRR8316907Gold flowering stage 40.435
SRR8316908Gold flowering stage 31.444
SRP132670SRR6706286Control12.287
SRR6706287Light intensity 50%19.916
SRR6706288Light intensity 20%11.193
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1145.475
CNS0095593Slightly white alabastrum(diploid) 2210.100
CNS0095594Slightly white alabastrum(diploid) 3163.634
CNS0095595Whole white alabastrum(diploid) 280.107
CNS0095596Whole white alabastrum(diploid) 318.003
CNS0095597Whole white alabastrum(diploid) 4100.960
CNS0095598Silvery flower (diploied) 1556.515
CNS0095599Silvery flower (diploied) 2393.845
CNS0095600Silvery flower (diploied) 3142.412
CNS0095601Golden flower (diploid) 1462.113
CNS0095602Golden flower (diploid) 2232.996
CNS0095603Golden flower (diploid) 3227.286
CNS0095604Slightly white alabastrum(tetraploid) 12.919
CNS0095605Slightly white alabastrum(tetraploid) 23.786
CNS0095606Slightly white alabastrum(tetraploid) 32.639
CNS0095607Whole white alabastrum(tetraploid) 14.046
CNS0095608Whole white alabastrum(tetraploid) 21.408
CNS0095609Whole white alabastrum(tetraploid) 31.784
CNS0095610Silvery flower (tetraploid) 120.921
CNS0095611Silvery flower (tetraploid) 26.434
CNS0095612Silvery flower (tetraploid) 355.921
CNS0095613Golden flower (tetraploid) 110.932
CNS0095614Golden flower (tetraploid) 210.272
CNS0095615Golden flower (tetraploid) 34.927
CRA001975CRR073297Stem 157.275
CRR073298Stem 274.601
CRR073299Stem 3101.436
CRR073300Leaf 1138.090
CRR073301Leaf 2187.922
CRR073302Leaf 3139.106
CRR073303Juvenile bud 1156.033
CRR073304Juvenile bud 2194.642
CRR073305Juvenile bud 3204.944
CRR073306Third green 143.524
CRR073307Third green 251.844
CRR073308Third green 348.431
CRR073309Second white 112.667
CRR073310Second white 215.625
CRR073311Second white 319.068
CRR073312Silver flowering 148.501
CRR073313Silver flowering 245.578
CRR073314Silver flowering 328.952
CRR073315Gold flowering 1109.825
CRR073316Gold flowering 2159.165
CRR073317Gold flowering 3235.251
CRR073318Tawny withering 197.644
CRR073319Tawny withering 2349.581
CRR073320Tawny withering 3166.196