Detail information of GWHGAAZE001080


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002523778.14.9606E-151oxidoreductase, putative [Ricinus communis]
Swissprottr|Q93ZB9|FACR3_ARATH1E-118Fatty acyl-CoA reductase 3
trEMBLtr|B9SCQ9|B9SCQ9_RICCO2E-151Oxidoreductase, putative {ECO:0000313|EMBL:EEF38504.1}
TAIR10AT4G33790.14E-90Jojoba acyl CoA reductase-related male sterility protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene2410331924114484-
GWHAAZE00000001mRNA2410331924114484-
GWHAAZE00000001exon2411440624114484-
GWHAAZE00000001exon2411425124114322-
GWHAAZE00000001exon2411213524112261-
GWHAAZE00000001exon2410524824105409-
GWHAAZE00000001exon2410489024104971-
GWHAAZE00000001exon2410434024104606-
GWHAAZE00000001exon2410370324103830-
GWHAAZE00000001exon2410331924103472-
GWHAAZE00000001CDS2411440624114484-
GWHAAZE00000001CDS2411425124114322-
GWHAAZE00000001CDS2411213524112261-
GWHAAZE00000001CDS2410524824105409-
GWHAAZE00000001CDS2410489024104971-
GWHAAZE00000001CDS2410434024104606-
GWHAAZE00000001CDS2410370324103830-
GWHAAZE00000001CDS2410331924103472-
Transcript Sequence

Network for GWHGAAZE001080

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07993.13NAD_binding_417503.70E-09
PF07993.13NAD_binding_4911844.60E-26
PF03015.20Sterile2583562.30E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13356FAR Cutin, suberine and wax biosynthesis map00073
Peroxisomemap04146
Longevity regulating pathway - wormmap04212

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.608
SRR3591706second leaf7.447
SRR3591707mature leaf4.698
SRR3591708Shoot apex1.998
SRR3591709Stem3.135
SRR3591710White floral bud4.318
SRR3591711White flower14.917
SRR3591712Green floral bud36.370
SRR3591713Yellow flower7.983
SRP173429 SRR8316895Juvenile bud stage 11.691
SRR8316896Juvenile bud stage 13.220
SRR8316897Juvenile bud stage 7.959
SRR8316894Third green stage 10.846
SRR8316900Third green stage 46.747
SRR8316901Third green stage 40.948
SRR8316898Complete white stage 5.035
SRR8316899Complete white stage 86.085
SRR8316903Complete white stage 7.087
SRR8316902Silver flowering stage2.892
SRR8316904Silver flowering stage3.069
SRR8316905Silver flowering stage0.804
SRR8316906Gold flowering stage 2.203
SRR8316907Gold flowering stage 1.373
SRR8316908Gold flowering stage 1.161
SRP132670SRR6706286Control44.269
SRR6706287Light intensity 50%47.485
SRR6706288Light intensity 20%64.448
CNP0000432CNS0095592Slightly white alabastrum(diploid) 118.715
CNS0095593Slightly white alabastrum(diploid) 26.163
CNS0095594Slightly white alabastrum(diploid) 39.810
CNS0095595Whole white alabastrum(diploid) 29.091
CNS0095596Whole white alabastrum(diploid) 312.019
CNS0095597Whole white alabastrum(diploid) 49.935
CNS0095598Silvery flower (diploied) 114.014
CNS0095599Silvery flower (diploied) 27.313
CNS0095600Silvery flower (diploied) 346.875
CNS0095601Golden flower (diploid) 18.992
CNS0095602Golden flower (diploid) 253.875
CNS0095603Golden flower (diploid) 350.053
CNS0095604Slightly white alabastrum(tetraploid) 120.534
CNS0095605Slightly white alabastrum(tetraploid) 215.485
CNS0095606Slightly white alabastrum(tetraploid) 345.208
CNS0095607Whole white alabastrum(tetraploid) 14.754
CNS0095608Whole white alabastrum(tetraploid) 23.206
CNS0095609Whole white alabastrum(tetraploid) 347.374
CNS0095610Silvery flower (tetraploid) 1100.726
CNS0095611Silvery flower (tetraploid) 2260.238
CNS0095612Silvery flower (tetraploid) 3116.019
CNS0095613Golden flower (tetraploid) 144.752
CNS0095614Golden flower (tetraploid) 261.745
CNS0095615Golden flower (tetraploid) 312.292
CRA001975CRR073297Stem 119.967
CRR073298Stem 219.991
CRR073299Stem 310.415
CRR073300Leaf 128.836
CRR073301Leaf 228.997
CRR073302Leaf 324.575
CRR073303Juvenile bud 128.226
CRR073304Juvenile bud 219.181
CRR073305Juvenile bud 332.566
CRR073306Third green 11.489
CRR073307Third green 20.266
CRR073308Third green 30.231
CRR073309Second white 11.713
CRR073310Second white 21.014
CRR073311Second white 30.317
CRR073312Silver flowering 10.470
CRR073313Silver flowering 21.156
CRR073314Silver flowering 30.888
CRR073315Gold flowering 112.512
CRR073316Gold flowering 28.580
CRR073317Gold flowering 310.554
CRR073318Tawny withering 133.542
CRR073319Tawny withering 25.434
CRR073320Tawny withering 378.569