Detail information of GWHGAAZE000869


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_003542002.16.08979E-93PREDICTED: LOB domain-containing protein 11-like [Glycine max]
Swissprottr|Q9LQR0|LBD1_ARATH6E-76LOB domain-containing protein 1
trEMBLtr|K7M386|K7M386_SOYBN2E-93Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G40370.2}
TAIR10AT1G07900.15E-60LOB domain-containing protein 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene1838722118388282+
GWHAAZE00000001mRNA1838722118388282+
GWHAAZE00000001exon1838722118387466+
GWHAAZE00000001exon1838795318388282+
GWHAAZE00000001CDS1838722118387466+
GWHAAZE00000001CDS1838795318388282+
Transcript Sequence

Network for GWHGAAZE000869

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03195.15LOB361332.70E-41
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyLOB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.720
SRR3591707mature leaf10.754
SRR3591708Shoot apex0.159
SRR3591709Stem8.455
SRR3591710White floral bud0.140
SRR3591711White flower1.474
SRR3591712Green floral bud0.175
SRR3591713Yellow flower7.848
SRP173429 SRR8316895Juvenile bud stage 0.227
SRR8316896Juvenile bud stage 1.484
SRR8316897Juvenile bud stage 0.162
SRR8316894Third green stage 0.000
SRR8316900Third green stage 0.000
SRR8316901Third green stage 0.123
SRR8316898Complete white stage 0.141
SRR8316899Complete white stage 0.178
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.339
SRR8316904Silver flowering stage0.236
SRR8316905Silver flowering stage0.454
SRR8316906Gold flowering stage 3.099
SRR8316907Gold flowering stage 2.963
SRR8316908Gold flowering stage 7.838
SRP132670SRR6706286Control0.425
SRR6706287Light intensity 50%0.300
SRR6706288Light intensity 20%0.248
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.204
CNS0095593Slightly white alabastrum(diploid) 20.759
CNS0095594Slightly white alabastrum(diploid) 30.364
CNS0095595Whole white alabastrum(diploid) 20.274
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 11.932
CNS0095599Silvery flower (diploied) 20.627
CNS0095600Silvery flower (diploied) 30.527
CNS0095601Golden flower (diploid) 12.021
CNS0095602Golden flower (diploid) 21.242
CNS0095603Golden flower (diploid) 30.813
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.119
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.059
CNS0095613Golden flower (tetraploid) 10.178
CNS0095614Golden flower (tetraploid) 20.931
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.132
CRR073298Stem 20.205
CRR073299Stem 30.156
CRR073300Leaf 10.000
CRR073301Leaf 20.366
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.189
CRR073306Third green 10.563
CRR073307Third green 20.127
CRR073308Third green 30.164
CRR073309Second white 11.994
CRR073310Second white 23.745
CRR073311Second white 31.587
CRR073312Silver flowering 13.405
CRR073313Silver flowering 25.313
CRR073314Silver flowering 34.671
CRR073315Gold flowering 13.863
CRR073316Gold flowering 28.376
CRR073317Gold flowering 311.442
CRR073318Tawny withering 133.707
CRR073319Tawny withering 250.276
CRR073320Tawny withering 311.541