Detail information of GWHGAAZE000763


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007016428.14.6155E-130ENTH/VHS family protein [Theobroma cacao]
Swissprottr|Q8VY07|EPN1_ARATH4E-17Clathrin interactor EPSIN 1
trEMBLtr|A0A061GXX0|A0A061GXX0_THECC2E-130ENTH/VHS family protein {ECO:0000313|EMBL:EOY34047.1}
TAIR10AT3G46540.16E-70ENTH/VHS family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene1544193115444429+
GWHAAZE00000001mRNA1544193115444429+
GWHAAZE00000001exon1544193115442037+
GWHAAZE00000001exon1544215815442280+
GWHAAZE00000001exon1544367815443839+
GWHAAZE00000001exon1544393415444429+
GWHAAZE00000001CDS1544193115442037+
GWHAAZE00000001CDS1544215815442280+
GWHAAZE00000001CDS1544367815443839+
GWHAAZE00000001CDS1544393415444429+
Transcript Sequence

Network for GWHGAAZE000763

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01417.21ENTH321532.70E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12471EPN Endocytosis map04144

Gene Ontology

GO term OntologyName

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE000763.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 30102030405060708090100Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.718
SRR3591706second leaf0.465
SRR3591707mature leaf2.344
SRR3591708Shoot apex1.147
SRR3591709Stem9.683
SRR3591710White floral bud4.227
SRR3591711White flower20.693
SRR3591712Green floral bud2.407
SRR3591713Yellow flower87.457
SRP173429 SRR8316895Juvenile bud stage 2.721
SRR8316896Juvenile bud stage 6.322
SRR8316897Juvenile bud stage 1.676
SRR8316894Third green stage 2.489
SRR8316900Third green stage 1.826
SRR8316901Third green stage 2.693
SRR8316898Complete white stage 1.183
SRR8316899Complete white stage 4.455
SRR8316903Complete white stage 2.826
SRR8316902Silver flowering stage13.865
SRR8316904Silver flowering stage13.626
SRR8316905Silver flowering stage8.151
SRR8316906Gold flowering stage 72.384
SRR8316907Gold flowering stage 47.928
SRR8316908Gold flowering stage 82.207
SRP132670SRR6706286Control1.783
SRR6706287Light intensity 50%1.038
SRR6706288Light intensity 20%1.073
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.885
CNS0095593Slightly white alabastrum(diploid) 22.832
CNS0095594Slightly white alabastrum(diploid) 32.390
CNS0095595Whole white alabastrum(diploid) 20.778
CNS0095596Whole white alabastrum(diploid) 30.373
CNS0095597Whole white alabastrum(diploid) 41.826
CNS0095598Silvery flower (diploied) 110.672
CNS0095599Silvery flower (diploied) 28.264
CNS0095600Silvery flower (diploied) 314.683
CNS0095601Golden flower (diploid) 121.782
CNS0095602Golden flower (diploid) 244.893
CNS0095603Golden flower (diploid) 339.367
CNS0095604Slightly white alabastrum(tetraploid) 10.705
CNS0095605Slightly white alabastrum(tetraploid) 20.244
CNS0095606Slightly white alabastrum(tetraploid) 32.254
CNS0095607Whole white alabastrum(tetraploid) 10.799
CNS0095608Whole white alabastrum(tetraploid) 20.249
CNS0095609Whole white alabastrum(tetraploid) 30.047
CNS0095610Silvery flower (tetraploid) 133.222
CNS0095611Silvery flower (tetraploid) 220.683
CNS0095612Silvery flower (tetraploid) 32.725
CNS0095613Golden flower (tetraploid) 143.313
CNS0095614Golden flower (tetraploid) 247.606
CNS0095615Golden flower (tetraploid) 320.439
CRA001975CRR073297Stem 10.729
CRR073298Stem 20.265
CRR073299Stem 30.460
CRR073300Leaf 10.136
CRR073301Leaf 20.635
CRR073302Leaf 30.046
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.084
CRR073305Juvenile bud 30.351
CRR073306Third green 10.341
CRR073307Third green 20.000
CRR073308Third green 30.030
CRR073309Second white 10.627
CRR073310Second white 21.453
CRR073311Second white 30.944
CRR073312Silver flowering 12.165
CRR073313Silver flowering 20.873
CRR073314Silver flowering 32.113
CRR073315Gold flowering 10.388
CRR073316Gold flowering 20.442
CRR073317Gold flowering 30.000
CRR073318Tawny withering 14.141
CRR073319Tawny withering 25.738
CRR073320Tawny withering 33.084