Detail information of GWHGAAZE000721


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007016311.18.3813E-160Highly ABA-induced PP2C gene 2 isoform 1 [Theobroma cacao]
Swissprottr|Q9ZW21|P2C24_ARATH3E-143Probable protein phosphatase 2C 24
trEMBLtr|A0A061GVN6|A0A061GVN6_THECC3E-160Highly ABA-induced PP2C gene 2 isoform 1 {ECO:0000313|EMBL:EOY33930.1}
TAIR10AT2G29380.12E-105highly ABA-induced PP2C gene 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene1462253514625572-
GWHAAZE00000001mRNA1462253514625572-
GWHAAZE00000001exon1462253514622960-
GWHAAZE00000001exon1462449114624805-
GWHAAZE00000001exon1462515614625572-
GWHAAZE00000001CDS1462515614625572-
GWHAAZE00000001CDS1462449114624805-
GWHAAZE00000001CDS1462253514622960-
Transcript Sequence

Network for GWHGAAZE000721

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00481.22PP2C933728.10E-65
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14497PP2C MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075

Gene Ontology

GO term OntologyName
GO:0043169molecular_functioncation binding
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.102
SRR3591706second leaf0.176
SRR3591707mature leaf0.744
SRR3591708Shoot apex0.634
SRR3591709Stem0.005
SRR3591710White floral bud10.154
SRR3591711White flower51.379
SRR3591712Green floral bud4.015
SRR3591713Yellow flower296.426
SRP173429 SRR8316895Juvenile bud stage 7.439
SRR8316896Juvenile bud stage 9.119
SRR8316897Juvenile bud stage 0.763
SRR8316894Third green stage 1.404
SRR8316900Third green stage 3.602
SRR8316901Third green stage 4.663
SRR8316898Complete white stage 4.193
SRR8316899Complete white stage 3.445
SRR8316903Complete white stage 5.393
SRR8316902Silver flowering stage24.659
SRR8316904Silver flowering stage27.996
SRR8316905Silver flowering stage19.294
SRR8316906Gold flowering stage 134.140
SRR8316907Gold flowering stage 183.033
SRR8316908Gold flowering stage 93.914
SRP132670SRR6706286Control12.686
SRR6706287Light intensity 50%14.832
SRR6706288Light intensity 20%11.458
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.978
CNS0095593Slightly white alabastrum(diploid) 21.747
CNS0095594Slightly white alabastrum(diploid) 38.297
CNS0095595Whole white alabastrum(diploid) 22.051
CNS0095596Whole white alabastrum(diploid) 31.797
CNS0095597Whole white alabastrum(diploid) 44.312
CNS0095598Silvery flower (diploied) 121.947
CNS0095599Silvery flower (diploied) 229.433
CNS0095600Silvery flower (diploied) 360.974
CNS0095601Golden flower (diploid) 173.264
CNS0095602Golden flower (diploid) 2170.471
CNS0095603Golden flower (diploid) 3167.068
CNS0095604Slightly white alabastrum(tetraploid) 12.873
CNS0095605Slightly white alabastrum(tetraploid) 22.442
CNS0095606Slightly white alabastrum(tetraploid) 30.748
CNS0095607Whole white alabastrum(tetraploid) 13.901
CNS0095608Whole white alabastrum(tetraploid) 22.902
CNS0095609Whole white alabastrum(tetraploid) 311.214
CNS0095610Silvery flower (tetraploid) 195.847
CNS0095611Silvery flower (tetraploid) 260.145
CNS0095612Silvery flower (tetraploid) 351.630
CNS0095613Golden flower (tetraploid) 1228.717
CNS0095614Golden flower (tetraploid) 2196.846
CNS0095615Golden flower (tetraploid) 3169.621
CRA001975CRR073297Stem 17.423
CRR073298Stem 26.047
CRR073299Stem 312.107
CRR073300Leaf 11.918
CRR073301Leaf 21.163
CRR073302Leaf 31.136
CRR073303Juvenile bud 10.173
CRR073304Juvenile bud 21.911
CRR073305Juvenile bud 30.069
CRR073306Third green 110.962
CRR073307Third green 29.245
CRR073308Third green 34.859
CRR073309Second white 118.367
CRR073310Second white 244.254
CRR073311Second white 333.546
CRR073312Silver flowering 1138.420
CRR073313Silver flowering 2190.193
CRR073314Silver flowering 3234.404
CRR073315Gold flowering 10.461
CRR073316Gold flowering 22.861
CRR073317Gold flowering 31.928
CRR073318Tawny withering 113.004
CRR073319Tawny withering 229.570
CRR073320Tawny withering 32.628