Detail information of GWHGAAZE000601


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP04063.10unnamed protein product [Coffea canephora]
Swissprottr|Q9C562|CIPKA_ARATH0CBL-interacting serine/threonine-protein kinase 10
trEMBLtr|A0A068U8W8|A0A068U8W8_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_11 {ECO:0000313|EMBL:CDP04063.1}
TAIR10AT5G58380.11E-163SOS3-interacting protein 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene1226775512269101-
GWHAAZE00000001mRNA1226775512269101-
GWHAAZE00000001exon1226825812269101-
GWHAAZE00000001exon1226775512268194-
GWHAAZE00000001CDS1226825812269101-
GWHAAZE00000001CDS1226775512268194-
Transcript Sequence

Network for GWHGAAZE000601

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase122663.00E-73
PF03822.15NAF2893477.20E-19
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CAMKL-CHK1

KEGG pathway

KO Enzyme pathway mapID
K07198PRKAA, AMPK Apelin signaling pathway map04371
FoxO signaling pathwaymap04068
PI3K-Akt signaling pathwaymap04151
AMPK signaling pathwaymap04152
mTOR signaling pathwaymap04150
Autophagy - animalmap04140
Tight junctionmap04530
Insulin signaling pathwaymap04910
Glucagon signaling pathwaymap04922
Adipocytokine signaling pathwaymap04920
Oxytocin signaling pathwaymap04921
Axon regenerationmap04361
Longevity regulating pathwaymap04211
Longevity regulating pathway - multiple speciesmap04213
Circadian rhythmmap04710
Thermogenesismap04714

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0007165biological_processsignal transduction
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf10.786
SRR3591706second leaf10.017
SRR3591707mature leaf26.875
SRR3591708Shoot apex8.540
SRR3591709Stem13.876
SRR3591710White floral bud14.369
SRR3591711White flower5.200
SRR3591712Green floral bud17.446
SRR3591713Yellow flower2.409
SRP173429 SRR8316895Juvenile bud stage 6.125
SRR8316896Juvenile bud stage 11.908
SRR8316897Juvenile bud stage 3.542
SRR8316894Third green stage 3.835
SRR8316900Third green stage 16.976
SRR8316901Third green stage 20.197
SRR8316898Complete white stage 7.482
SRR8316899Complete white stage 14.807
SRR8316903Complete white stage 6.633
SRR8316902Silver flowering stage6.390
SRR8316904Silver flowering stage6.372
SRR8316905Silver flowering stage3.852
SRR8316906Gold flowering stage 10.401
SRR8316907Gold flowering stage 11.068
SRR8316908Gold flowering stage 11.235
SRP132670SRR6706286Control9.383
SRR6706287Light intensity 50%10.046
SRR6706288Light intensity 20%9.478
CNP0000432CNS0095592Slightly white alabastrum(diploid) 122.094
CNS0095593Slightly white alabastrum(diploid) 218.304
CNS0095594Slightly white alabastrum(diploid) 325.020
CNS0095595Whole white alabastrum(diploid) 238.576
CNS0095596Whole white alabastrum(diploid) 348.950
CNS0095597Whole white alabastrum(diploid) 452.780
CNS0095598Silvery flower (diploied) 114.811
CNS0095599Silvery flower (diploied) 212.541
CNS0095600Silvery flower (diploied) 312.331
CNS0095601Golden flower (diploid) 19.832
CNS0095602Golden flower (diploid) 211.270
CNS0095603Golden flower (diploid) 310.422
CNS0095604Slightly white alabastrum(tetraploid) 122.492
CNS0095605Slightly white alabastrum(tetraploid) 223.103
CNS0095606Slightly white alabastrum(tetraploid) 34.828
CNS0095607Whole white alabastrum(tetraploid) 144.439
CNS0095608Whole white alabastrum(tetraploid) 252.914
CNS0095609Whole white alabastrum(tetraploid) 321.244
CNS0095610Silvery flower (tetraploid) 18.699
CNS0095611Silvery flower (tetraploid) 210.109
CNS0095612Silvery flower (tetraploid) 37.217
CNS0095613Golden flower (tetraploid) 16.907
CNS0095614Golden flower (tetraploid) 26.454
CNS0095615Golden flower (tetraploid) 310.498
CRA001975CRR073297Stem 15.610
CRR073298Stem 25.636
CRR073299Stem 33.941
CRR073300Leaf 19.413
CRR073301Leaf 28.550
CRR073302Leaf 34.011
CRR073303Juvenile bud 19.714
CRR073304Juvenile bud 27.889
CRR073305Juvenile bud 33.298
CRR073306Third green 17.288
CRR073307Third green 27.203
CRR073308Third green 37.752
CRR073309Second white 14.389
CRR073310Second white 25.812
CRR073311Second white 33.886
CRR073312Silver flowering 13.759
CRR073313Silver flowering 24.751
CRR073314Silver flowering 32.526
CRR073315Gold flowering 119.486
CRR073316Gold flowering 219.680
CRR073317Gold flowering 39.301
CRR073318Tawny withering 112.998
CRR073319Tawny withering 211.512
CRR073320Tawny withering 312.212