Detail information of GWHGAAZE000598


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008243460.10PREDICTED: CBL-interacting serine/threonine-protein kinase 11 [Prunus mume]
Swissprottr|O22932|CIPKB_ARATH0CBL-interacting serine/threonine-protein kinase 11
trEMBLtr|A0MNK3|A0MNK3_POPTR0Uncharacterized protein {ECO:0000313|EMBL:EEE95338.2}
TAIR10AT2G30360.12E-153SOS3-interacting protein 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene1224468912245939+
GWHAAZE00000001mRNA1224468912245939+
GWHAAZE00000001exon1224468912245939+
GWHAAZE00000001CDS1224468912245939+
Transcript Sequence

Network for GWHGAAZE000598

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase122662.40E-72
PF03822.15NAF2933482.00E-18
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CAMKL-CHK1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0007165biological_processsignal transduction
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf39.529
SRR3591706second leaf13.539
SRR3591707mature leaf56.874
SRR3591708Shoot apex16.219
SRR3591709Stem56.468
SRR3591710White floral bud440.599
SRR3591711White flower76.787
SRR3591712Green floral bud322.670
SRR3591713Yellow flower106.069
SRP173429 SRR8316895Juvenile bud stage 29.996
SRR8316896Juvenile bud stage 47.780
SRR8316897Juvenile bud stage 23.172
SRR8316894Third green stage 24.346
SRR8316900Third green stage 174.128
SRR8316901Third green stage 159.345
SRR8316898Complete white stage 31.317
SRR8316899Complete white stage 76.815
SRR8316903Complete white stage 41.883
SRR8316902Silver flowering stage32.178
SRR8316904Silver flowering stage41.521
SRR8316905Silver flowering stage19.373
SRR8316906Gold flowering stage 88.117
SRR8316907Gold flowering stage 85.648
SRR8316908Gold flowering stage 66.515
SRP132670SRR6706286Control175.253
SRR6706287Light intensity 50%189.374
SRR6706288Light intensity 20%166.089
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1119.012
CNS0095593Slightly white alabastrum(diploid) 2118.579
CNS0095594Slightly white alabastrum(diploid) 3128.021
CNS0095595Whole white alabastrum(diploid) 2419.698
CNS0095596Whole white alabastrum(diploid) 3448.570
CNS0095597Whole white alabastrum(diploid) 4648.221
CNS0095598Silvery flower (diploied) 165.028
CNS0095599Silvery flower (diploied) 2145.254
CNS0095600Silvery flower (diploied) 381.680
CNS0095601Golden flower (diploid) 162.733
CNS0095602Golden flower (diploid) 283.912
CNS0095603Golden flower (diploid) 378.559
CNS0095604Slightly white alabastrum(tetraploid) 1265.017
CNS0095605Slightly white alabastrum(tetraploid) 2289.240
CNS0095606Slightly white alabastrum(tetraploid) 316.197
CNS0095607Whole white alabastrum(tetraploid) 1659.748
CNS0095608Whole white alabastrum(tetraploid) 2802.172
CNS0095609Whole white alabastrum(tetraploid) 3327.060
CNS0095610Silvery flower (tetraploid) 147.789
CNS0095611Silvery flower (tetraploid) 276.489
CNS0095612Silvery flower (tetraploid) 3161.919
CNS0095613Golden flower (tetraploid) 154.407
CNS0095614Golden flower (tetraploid) 253.734
CNS0095615Golden flower (tetraploid) 3112.181
CRA001975CRR073297Stem 170.056
CRR073298Stem 270.293
CRR073299Stem 369.149
CRR073300Leaf 1289.880
CRR073301Leaf 2200.864
CRR073302Leaf 3135.006
CRR073303Juvenile bud 1295.585
CRR073304Juvenile bud 2269.556
CRR073305Juvenile bud 3147.512
CRR073306Third green 1841.460
CRR073307Third green 2671.427
CRR073308Third green 3698.262
CRR073309Second white 11247.214
CRR073310Second white 2921.197
CRR073311Second white 3852.322
CRR073312Silver flowering 1901.496
CRR073313Silver flowering 21084.055
CRR073314Silver flowering 3827.684
CRR073315Gold flowering 1173.459
CRR073316Gold flowering 259.475
CRR073317Gold flowering 349.083
CRR073318Tawny withering 1170.477
CRR073319Tawny withering 2138.531
CRR073320Tawny withering 3161.130