Detail information of GWHGAAZE000559


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU42429.11.3595E-150hypothetical protein MIMGU_mgv1a012042mg [Erythranthe guttata]
Swissprottr|Q9SPB3|RL10_VITRI8E-15160S ribosomal protein L10
trEMBLtr|A0A022RQX3|A0A022RQX3_ERYGU5E-151Uncharacterized protein {ECO:0000313|EMBL:EYU42429.1}
TAIR10AT1G26910.11E-109Ribosomal protein L16p/L10e family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene1122204811223490-
GWHAAZE00000001mRNA1122204811223490-
GWHAAZE00000001exon1122204811222116-
GWHAAZE00000001exon1122246611222547-
GWHAAZE00000001exon1122269411223195-
GWHAAZE00000001exon1122345711223490-
GWHAAZE00000001CDS1122345711223490-
GWHAAZE00000001CDS1122269411223195-
GWHAAZE00000001CDS1122246611222547-
GWHAAZE00000001CDS1122204811222116-
Transcript Sequence

Network for GWHGAAZE000559

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00252.19Ribosomal_L16201741.30E-36
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02866RP-L10e, RPL10 Ribosome map03010

Gene Ontology

GO term OntologyName
GO:0006412biological_processtranslation
GO:0005840cellular_componentribosome
GO:0003735molecular_functionstructural constituent of ribosome

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1010.746
SRR3591706second leaf507.790
SRR3591707mature leaf297.856
SRR3591708Shoot apex1091.114
SRR3591709Stem545.578
SRR3591710White floral bud639.022
SRR3591711White flower868.507
SRR3591712Green floral bud1001.831
SRR3591713Yellow flower741.392
SRP173429 SRR8316895Juvenile bud stage 363.803
SRR8316896Juvenile bud stage 445.685
SRR8316897Juvenile bud stage 292.567
SRR8316894Third green stage 217.892
SRR8316900Third green stage 859.608
SRR8316901Third green stage 796.763
SRR8316898Complete white stage 246.935
SRR8316899Complete white stage 943.713
SRR8316903Complete white stage 346.491
SRR8316902Silver flowering stage295.859
SRR8316904Silver flowering stage287.200
SRR8316905Silver flowering stage165.054
SRR8316906Gold flowering stage 547.290
SRR8316907Gold flowering stage 595.041
SRR8316908Gold flowering stage 747.539
SRP132670SRR6706286Control646.440
SRR6706287Light intensity 50%659.291
SRR6706288Light intensity 20%718.551
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1557.766
CNS0095593Slightly white alabastrum(diploid) 2692.429
CNS0095594Slightly white alabastrum(diploid) 3491.406
CNS0095595Whole white alabastrum(diploid) 2526.652
CNS0095596Whole white alabastrum(diploid) 3577.323
CNS0095597Whole white alabastrum(diploid) 4418.230
CNS0095598Silvery flower (diploied) 1370.119
CNS0095599Silvery flower (diploied) 2406.106
CNS0095600Silvery flower (diploied) 3399.444
CNS0095601Golden flower (diploid) 1317.766
CNS0095602Golden flower (diploid) 2377.964
CNS0095603Golden flower (diploid) 3353.557
CNS0095604Slightly white alabastrum(tetraploid) 1526.813
CNS0095605Slightly white alabastrum(tetraploid) 2495.119
CNS0095606Slightly white alabastrum(tetraploid) 3744.157
CNS0095607Whole white alabastrum(tetraploid) 1268.262
CNS0095608Whole white alabastrum(tetraploid) 2268.339
CNS0095609Whole white alabastrum(tetraploid) 3570.812
CNS0095610Silvery flower (tetraploid) 1457.097
CNS0095611Silvery flower (tetraploid) 2367.189
CNS0095612Silvery flower (tetraploid) 3282.539
CNS0095613Golden flower (tetraploid) 1327.426
CNS0095614Golden flower (tetraploid) 2393.147
CNS0095615Golden flower (tetraploid) 3368.332
CRA001975CRR073297Stem 1638.751
CRR073298Stem 2689.094
CRR073299Stem 3849.453
CRR073300Leaf 1782.954
CRR073301Leaf 2846.091
CRR073302Leaf 31147.561
CRR073303Juvenile bud 1950.643
CRR073304Juvenile bud 2969.007
CRR073305Juvenile bud 3853.741
CRR073306Third green 1310.753
CRR073307Third green 2345.863
CRR073308Third green 3303.383
CRR073309Second white 1396.558
CRR073310Second white 2306.794
CRR073311Second white 3193.510
CRR073312Silver flowering 1331.770
CRR073313Silver flowering 2560.806
CRR073314Silver flowering 3345.128
CRR073315Gold flowering 1466.733
CRR073316Gold flowering 2438.544
CRR073317Gold flowering 3466.992
CRR073318Tawny withering 1745.856
CRR073319Tawny withering 2679.346
CRR073320Tawny withering 3663.672