Detail information of GWHGAAZE000545


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007017120.13.1805E-132Coiled-coil domain-containing protein 109A isoform 1 [Theobroma cacao]
Swissprottr|F4I111|MCU6_ARATH2E-103Calcium uniporter protein 6, mitochondrial (Precursor)
trEMBLtr|A0A061H0G4|A0A061H0G4_THECC1E-132Coiled-coil domain-containing protein 109A isoform 1 {ECO:0000313|EMBL:EOY34739.1}
TAIR10AT1G09575.17E-84Protein of unknown function (DUF607)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene1090342210906998+
GWHAAZE00000001mRNA1090342210906998+
GWHAAZE00000001exon1090342210903832+
GWHAAZE00000001exon1090590010906022+
GWHAAZE00000001exon1090664810906998+
GWHAAZE00000001CDS1090342210903832+
GWHAAZE00000001CDS1090590010906022+
GWHAAZE00000001CDS1090664810906998+
Transcript Sequence

Network for GWHGAAZE000545

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04678.14MCU1092672.70E-50
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K20858MCU Calcium signaling pathway map04020
Cellular senescencemap04218
NOD-like receptor signaling pathwaymap04621

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf23.620
SRR3591706second leaf6.390
SRR3591707mature leaf5.730
SRR3591708Shoot apex10.868
SRR3591709Stem17.185
SRR3591710White floral bud16.756
SRR3591711White flower14.950
SRR3591712Green floral bud24.775
SRR3591713Yellow flower14.959
SRP173429 SRR8316895Juvenile bud stage 21.563
SRR8316896Juvenile bud stage 29.324
SRR8316897Juvenile bud stage 22.949
SRR8316894Third green stage 8.074
SRR8316900Third green stage 33.710
SRR8316901Third green stage 44.829
SRR8316898Complete white stage 13.204
SRR8316899Complete white stage 45.402
SRR8316903Complete white stage 17.839
SRR8316902Silver flowering stage8.178
SRR8316904Silver flowering stage8.662
SRR8316905Silver flowering stage7.700
SRR8316906Gold flowering stage 22.062
SRR8316907Gold flowering stage 22.115
SRR8316908Gold flowering stage 24.377
SRP132670SRR6706286Control25.289
SRR6706287Light intensity 50%24.228
SRR6706288Light intensity 20%23.820
CNP0000432CNS0095592Slightly white alabastrum(diploid) 128.896
CNS0095593Slightly white alabastrum(diploid) 236.702
CNS0095594Slightly white alabastrum(diploid) 337.156
CNS0095595Whole white alabastrum(diploid) 238.154
CNS0095596Whole white alabastrum(diploid) 338.413
CNS0095597Whole white alabastrum(diploid) 430.898
CNS0095598Silvery flower (diploied) 125.643
CNS0095599Silvery flower (diploied) 223.407
CNS0095600Silvery flower (diploied) 320.263
CNS0095601Golden flower (diploid) 128.329
CNS0095602Golden flower (diploid) 226.313
CNS0095603Golden flower (diploid) 324.908
CNS0095604Slightly white alabastrum(tetraploid) 129.871
CNS0095605Slightly white alabastrum(tetraploid) 230.480
CNS0095606Slightly white alabastrum(tetraploid) 311.343
CNS0095607Whole white alabastrum(tetraploid) 140.706
CNS0095608Whole white alabastrum(tetraploid) 238.831
CNS0095609Whole white alabastrum(tetraploid) 326.498
CNS0095610Silvery flower (tetraploid) 112.377
CNS0095611Silvery flower (tetraploid) 28.382
CNS0095612Silvery flower (tetraploid) 36.942
CNS0095613Golden flower (tetraploid) 17.711
CNS0095614Golden flower (tetraploid) 29.925
CNS0095615Golden flower (tetraploid) 311.336
CRA001975CRR073297Stem 116.149
CRR073298Stem 222.947
CRR073299Stem 314.649
CRR073300Leaf 134.025
CRR073301Leaf 234.771
CRR073302Leaf 321.291
CRR073303Juvenile bud 121.966
CRR073304Juvenile bud 232.438
CRR073305Juvenile bud 325.231
CRR073306Third green 18.549
CRR073307Third green 210.497
CRR073308Third green 36.041
CRR073309Second white 12.969
CRR073310Second white 25.154
CRR073311Second white 34.612
CRR073312Silver flowering 16.497
CRR073313Silver flowering 26.396
CRR073314Silver flowering 36.682
CRR073315Gold flowering 17.027
CRR073316Gold flowering 29.800
CRR073317Gold flowering 39.406
CRR073318Tawny withering 111.821
CRR073319Tawny withering 219.992
CRR073320Tawny withering 39.014