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Detail information of GWHGAAZE000483
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_009803135.1
0
PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Nicotiana sylvestris]
Swissprot
tr|Q38931|FKB62_ARATH
0
Peptidyl-prolyl cis-trans isomerase FKBP62
trEMBL
tr|A0A067LKQ9|A0A067LKQ9_JATCU
0
Uncharacterized protein {ECO:0000313|EMBL:KDP45275.1}
TAIR10
AT3G25230.2
0
rotamase FKBP 1
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000001
gene
9279163
9283595
+
GWHAAZE00000001
mRNA
9279163
9283595
+
GWHAAZE00000001
exon
9279163
9279337
+
GWHAAZE00000001
exon
9279436
9279522
+
GWHAAZE00000001
exon
9281162
9281422
+
GWHAAZE00000001
exon
9281522
9281596
+
GWHAAZE00000001
exon
9281700
9281780
+
GWHAAZE00000001
exon
9281864
9282058
+
GWHAAZE00000001
exon
9282162
9282254
+
GWHAAZE00000001
exon
9282336
9282511
+
GWHAAZE00000001
exon
9282603
9282690
+
GWHAAZE00000001
exon
9282847
9282953
+
GWHAAZE00000001
exon
9283117
9283244
+
GWHAAZE00000001
exon
9283359
9283479
+
GWHAAZE00000001
exon
9283581
9283595
+
GWHAAZE00000001
CDS
9279163
9279337
+
GWHAAZE00000001
CDS
9279436
9279522
+
GWHAAZE00000001
CDS
9281162
9281422
+
GWHAAZE00000001
CDS
9281522
9281596
+
GWHAAZE00000001
CDS
9281700
9281780
+
GWHAAZE00000001
CDS
9281864
9282058
+
GWHAAZE00000001
CDS
9282162
9282254
+
GWHAAZE00000001
CDS
9282336
9282511
+
GWHAAZE00000001
CDS
9282603
9282690
+
GWHAAZE00000001
CDS
9282847
9282953
+
GWHAAZE00000001
CDS
9283117
9283244
+
GWHAAZE00000001
CDS
9283359
9283479
+
GWHAAZE00000001
CDS
9283581
9283595
+
Transcript Sequence
>GWHTAAZE000485 ATGGACGAGGATTTTGATCTTCCACCAACCGACGAGATGAACGAGGATTTTGACATGCCGGAATCGTTCATGAAGGTTGGGGAAGAGAAGGAGATCGGAAAGGAAGGGTTGAAGAAGAAGTTGGTTAAGGAAGGTGAAGGTTTTGATACTCCTGATAATGGAGATGAAGTTGAAGTCCACTACACTGGAACTTTACTTGATGGAACGAAGTTTGATTCGAGTCGAGATAGGGGGACTCCGTTTAAGTTCACTCTCGGACAAGGACAAGTAATTAAGGGATGGGACCTAGGAATCAAGACAATGAAGAAGGGTGAAAAAGCCATTTTCACCATTCCAGCAGATCTAGCTTATGGTGAGTCTGGTTCTCCGCCGACCATTCCCCCAAGTGCTACTCTCCAGTTTGATGTCGAACTGCTATCATGGGCCAGCATTAAGGACATCTGCAAGGACGGTGGAATCATAAAGAAGATTCTTAGAGAAGGAGAAAAATGGGAGAATCCTAAGGACCTTGATGAAGTGTTAGTTAAGTATGAAGTACAACTTGAGGATGGAACTTTGATTGCAAAATCAGATGGAGTAGAGTTCACTGTTCAAGAAGGTCATTTCTGTCCTGCATTGGGCAAGGCTGTAAAAACAATGAAGAAAGGAGAAAAGGTTAACCTGATAGTGAGATCACAATATGGGTTTGGGGAGAAAGGTAAGCCTGCTTCTGGTGATGAAGGTCTGGTCCCACCAAATGCAACATTGTTGGTTACTCTCGAGCTGGTATCGTGGAAGACTGTATCGCATGTCACGGATGACAAAAAAGTTATTAAAAAGATCATAAAGGAAGGGGAGGGATATGAACGGCCTAATGAAGGAGCTGTTGTTACACTGAAATTGATTGGGAAGTTGGAAGACGGTACTGTTTTCATTAAGAAAGGTTACAATGATGAAGGGGAGCCTCTTGAGTTTAGGACAGAAGAAGAGCAAGTTATAGACGGGCTTGATAGAGCGGTGATGACAATGAAGAAAGCTGAGGTTGCACTGCTCACAATTGCACCGGAGTATGCCTTTGGAACAACTGGGTCACAGCAAGAACTGGCTGTGGTCCCACCCAACTCGACGGTGTGCTACGAGGTCGAGCTTGTTTCTTTCGTCAAGGAGAAGGAATCTTGGGATATGAACACTGAGGAAAAGATTGAGGCGGCTGGGAAAAGAGAAGGAAGAAGGGAATGGATTTTTCAAGGCGAGGAGAAGAAGGCGGCCAAAGCATTGAAGGTCACTTGCAATTTAAATAATGCAGCTTGCCAACTGAAACTGAAGGAGTACAAACAGGCGGAGAAACTTTGTACCAAGGTGTTGGAAAGTGAGAGGACGAATGTGAAGGCACTTTACAGGAGGGCTCAAGCTTATATTAATCTAGCTGATCTGGATTTGGCAGAGATTGATATAAAGAAGGCCCTTGAAATTGATCCCAACAACAGGGATGTGAAACTGGAATATAAAGTATTGAAGGAGAAGATGAAAGAATTCAACAAGAAAGATGCTAAGTTTTATGGGAATATGTTTGCCAAATTGAATAAGCTGGAGTCTCTGAGATCTAATAAAGCGGCCGCATAG
Network for GWHGAAZE000483
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF00254.29
FKBP_C
51
139
3.70E-33
PF00254.29
FKBP_C
166
255
1.30E-15
PF00254.29
FKBP_C
281
377
3.40E-20
PF00515.29
TPR_1
455
488
9.20E-07
Protein Sequence
>GWHPAAZE000484 MDEDFDLPPTDEMNEDFDMPESFMKVGEEKEIGKEGLKKKLVKEGEGFDTPDNGDEVEVHYTGTLLDGTKFDSSRDRGTPFKFTLGQGQVIKGWDLGIKTMKKGEKAIFTIPADLAYGESGSPPTIPPSATLQFDVELLSWASIKDICKDGGIIKKILREGEKWENPKDLDEVLVKYEVQLEDGTLIAKSDGVEFTVQEGHFCPALGKAVKTMKKGEKVNLIVRSQYGFGEKGKPASGDEGLVPPNATLLVTLELVSWKTVSHVTDDKKVIKKIIKEGEGYERPNEGAVVTLKLIGKLEDGTVFIKKGYNDEGEPLEFRTEEEQVIDGLDRAVMTMKKAEVALLTIAPEYAFGTTGSQQELAVVPPNSTVCYEVELVSFVKEKESWDMNTEEKIEAAGKREGRREWIFQGEEKKAAKALKVTCNLNNAACQLKLKEYKQAEKLCTKVLESERTNVKALYRRAQAYINLADLDLAEIDIKKALEIDPNNRDVKLEYKVLKEKMKEFNKKDAKFYGNMFAKLNKLESLRSNKAAA
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
K09571
FKBP4_5
Estrogen signaling pathway
map04915
Gene Ontology
GO term
Ontology
Name
GO:0005515
molecular_function
protein binding
GO:0003755
molecular_function
peptidyl-prolyl cis-trans isomerase activity
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
113.281
SRR3591706
second leaf
53.190
SRR3591707
mature leaf
48.750
SRR3591708
Shoot apex
81.757
SRR3591709
Stem
82.855
SRR3591710
White floral bud
111.624
SRR3591711
White flower
100.622
SRR3591712
Green floral bud
143.681
SRR3591713
Yellow flower
65.856
SRP173429
SRR8316895
Juvenile bud stage
115.572
SRR8316896
Juvenile bud stage
169.106
SRR8316897
Juvenile bud stage
80.881
SRR8316894
Third green stage
50.888
SRR8316900
Third green stage
169.429
SRR8316901
Third green stage
159.882
SRR8316898
Complete white stage
48.944
SRR8316899
Complete white stage
142.391
SRR8316903
Complete white stage
115.390
SRR8316902
Silver flowering stage
68.933
SRR8316904
Silver flowering stage
95.913
SRR8316905
Silver flowering stage
64.588
SRR8316906
Gold flowering stage
166.994
SRR8316907
Gold flowering stage
160.017
SRR8316908
Gold flowering stage
138.707
SRP132670
SRR6706286
Control
214.333
SRR6706287
Light intensity 50%
207.007
SRR6706288
Light intensity 20%
205.160
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
84.431
CNS0095593
Slightly white alabastrum(diploid) 2
89.316
CNS0095594
Slightly white alabastrum(diploid) 3
86.407
CNS0095595
Whole white alabastrum(diploid) 2
82.645
CNS0095596
Whole white alabastrum(diploid) 3
77.036
CNS0095597
Whole white alabastrum(diploid) 4
77.554
CNS0095598
Silvery flower (diploied) 1
105.967
CNS0095599
Silvery flower (diploied) 2
176.052
CNS0095600
Silvery flower (diploied) 3
160.521
CNS0095601
Golden flower (diploid) 1
212.995
CNS0095602
Golden flower (diploid) 2
142.462
CNS0095603
Golden flower (diploid) 3
143.499
CNS0095604
Slightly white alabastrum(tetraploid) 1
126.037
CNS0095605
Slightly white alabastrum(tetraploid) 2
97.939
CNS0095606
Slightly white alabastrum(tetraploid) 3
272.922
CNS0095607
Whole white alabastrum(tetraploid) 1
67.923
CNS0095608
Whole white alabastrum(tetraploid) 2
50.859
CNS0095609
Whole white alabastrum(tetraploid) 3
208.815
CNS0095610
Silvery flower (tetraploid) 1
151.651
CNS0095611
Silvery flower (tetraploid) 2
188.119
CNS0095612
Silvery flower (tetraploid) 3
259.474
CNS0095613
Golden flower (tetraploid) 1
107.976
CNS0095614
Golden flower (tetraploid) 2
142.494
CNS0095615
Golden flower (tetraploid) 3
69.307
CRA001975
CRR073297
Stem 1
102.286
CRR073298
Stem 2
107.332
CRR073299
Stem 3
115.829
CRR073300
Leaf 1
153.142
CRR073301
Leaf 2
134.604
CRR073302
Leaf 3
120.031
CRR073303
Juvenile bud 1
162.094
CRR073304
Juvenile bud 2
168.410
CRR073305
Juvenile bud 3
148.529
CRR073306
Third green 1
157.104
CRR073307
Third green 2
93.507
CRR073308
Third green 3
117.520
CRR073309
Second white 1
97.533
CRR073310
Second white 2
129.036
CRR073311
Second white 3
112.608
CRR073312
Silver flowering 1
46.667
CRR073313
Silver flowering 2
31.516
CRR073314
Silver flowering 3
32.226
CRR073315
Gold flowering 1
29.560
CRR073316
Gold flowering 2
34.164
CRR073317
Gold flowering 3
22.129
CRR073318
Tawny withering 1
59.974
CRR073319
Tawny withering 2
46.353
CRR073320
Tawny withering 3
56.997