Detail information of GWHGAAZE000483


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009803135.10PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Nicotiana sylvestris]
Swissprottr|Q38931|FKB62_ARATH0Peptidyl-prolyl cis-trans isomerase FKBP62
trEMBLtr|A0A067LKQ9|A0A067LKQ9_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP45275.1}
TAIR10AT3G25230.20rotamase FKBP 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene92791639283595+
GWHAAZE00000001mRNA92791639283595+
GWHAAZE00000001exon92791639279337+
GWHAAZE00000001exon92794369279522+
GWHAAZE00000001exon92811629281422+
GWHAAZE00000001exon92815229281596+
GWHAAZE00000001exon92817009281780+
GWHAAZE00000001exon92818649282058+
GWHAAZE00000001exon92821629282254+
GWHAAZE00000001exon92823369282511+
GWHAAZE00000001exon92826039282690+
GWHAAZE00000001exon92828479282953+
GWHAAZE00000001exon92831179283244+
GWHAAZE00000001exon92833599283479+
GWHAAZE00000001exon92835819283595+
GWHAAZE00000001CDS92791639279337+
GWHAAZE00000001CDS92794369279522+
GWHAAZE00000001CDS92811629281422+
GWHAAZE00000001CDS92815229281596+
GWHAAZE00000001CDS92817009281780+
GWHAAZE00000001CDS92818649282058+
GWHAAZE00000001CDS92821629282254+
GWHAAZE00000001CDS92823369282511+
GWHAAZE00000001CDS92826039282690+
GWHAAZE00000001CDS92828479282953+
GWHAAZE00000001CDS92831179283244+
GWHAAZE00000001CDS92833599283479+
GWHAAZE00000001CDS92835819283595+
Transcript Sequence

Network for GWHGAAZE000483

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00254.29FKBP_C511393.70E-33
PF00254.29FKBP_C1662551.30E-15
PF00254.29FKBP_C2813773.40E-20
PF00515.29TPR_14554889.20E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09571FKBP4_5 Estrogen signaling pathway map04915

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding
GO:0003755molecular_functionpeptidyl-prolyl cis-trans isomerase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf113.281
SRR3591706second leaf53.190
SRR3591707mature leaf48.750
SRR3591708Shoot apex81.757
SRR3591709Stem82.855
SRR3591710White floral bud111.624
SRR3591711White flower100.622
SRR3591712Green floral bud143.681
SRR3591713Yellow flower65.856
SRP173429 SRR8316895Juvenile bud stage 115.572
SRR8316896Juvenile bud stage 169.106
SRR8316897Juvenile bud stage 80.881
SRR8316894Third green stage 50.888
SRR8316900Third green stage 169.429
SRR8316901Third green stage 159.882
SRR8316898Complete white stage 48.944
SRR8316899Complete white stage 142.391
SRR8316903Complete white stage 115.390
SRR8316902Silver flowering stage68.933
SRR8316904Silver flowering stage95.913
SRR8316905Silver flowering stage64.588
SRR8316906Gold flowering stage 166.994
SRR8316907Gold flowering stage 160.017
SRR8316908Gold flowering stage 138.707
SRP132670SRR6706286Control214.333
SRR6706287Light intensity 50%207.007
SRR6706288Light intensity 20%205.160
CNP0000432CNS0095592Slightly white alabastrum(diploid) 184.431
CNS0095593Slightly white alabastrum(diploid) 289.316
CNS0095594Slightly white alabastrum(diploid) 386.407
CNS0095595Whole white alabastrum(diploid) 282.645
CNS0095596Whole white alabastrum(diploid) 377.036
CNS0095597Whole white alabastrum(diploid) 477.554
CNS0095598Silvery flower (diploied) 1105.967
CNS0095599Silvery flower (diploied) 2176.052
CNS0095600Silvery flower (diploied) 3160.521
CNS0095601Golden flower (diploid) 1212.995
CNS0095602Golden flower (diploid) 2142.462
CNS0095603Golden flower (diploid) 3143.499
CNS0095604Slightly white alabastrum(tetraploid) 1126.037
CNS0095605Slightly white alabastrum(tetraploid) 297.939
CNS0095606Slightly white alabastrum(tetraploid) 3272.922
CNS0095607Whole white alabastrum(tetraploid) 167.923
CNS0095608Whole white alabastrum(tetraploid) 250.859
CNS0095609Whole white alabastrum(tetraploid) 3208.815
CNS0095610Silvery flower (tetraploid) 1151.651
CNS0095611Silvery flower (tetraploid) 2188.119
CNS0095612Silvery flower (tetraploid) 3259.474
CNS0095613Golden flower (tetraploid) 1107.976
CNS0095614Golden flower (tetraploid) 2142.494
CNS0095615Golden flower (tetraploid) 369.307
CRA001975CRR073297Stem 1102.286
CRR073298Stem 2107.332
CRR073299Stem 3115.829
CRR073300Leaf 1153.142
CRR073301Leaf 2134.604
CRR073302Leaf 3120.031
CRR073303Juvenile bud 1162.094
CRR073304Juvenile bud 2168.410
CRR073305Juvenile bud 3148.529
CRR073306Third green 1157.104
CRR073307Third green 293.507
CRR073308Third green 3117.520
CRR073309Second white 197.533
CRR073310Second white 2129.036
CRR073311Second white 3112.608
CRR073312Silver flowering 146.667
CRR073313Silver flowering 231.516
CRR073314Silver flowering 332.226
CRR073315Gold flowering 129.560
CRR073316Gold flowering 234.164
CRR073317Gold flowering 322.129
CRR073318Tawny withering 159.974
CRR073319Tawny withering 246.353
CRR073320Tawny withering 356.997