Detail information of GWHGAAZE000279


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP03674.11.8815E-110unnamed protein product [Coffea canephora]
Swissprottr|Q9LUH8|HFA6B_ARATH1E-71Heat stress transcription factor A-6b
trEMBLtr|A0A068U6A9|A0A068U6A9_COFCA7E-111Coffea canephora DH200=94 genomic scaffold, scaffold_11 {ECO:0000313|EMBL:CDP03674.1}
TAIR10AT3G22830.19E-57heat shock transcription factor A6B

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene55205185521421+
GWHAAZE00000001mRNA55205185521421+
GWHAAZE00000001exon55205185520523+
GWHAAZE00000001exon55206365521421+
GWHAAZE00000001CDS55205185520523+
GWHAAZE00000001CDS55206365521421+
Transcript Sequence

Network for GWHGAAZE000279

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00447.18HSF_DNA-bind1330.00016
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyHSF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf14.933
SRR3591706second leaf45.963
SRR3591707mature leaf62.647
SRR3591708Shoot apex34.118
SRR3591709Stem13.207
SRR3591710White floral bud8.858
SRR3591711White flower4.862
SRR3591712Green floral bud6.084
SRR3591713Yellow flower2.796
SRP173429 SRR8316895Juvenile bud stage 27.110
SRR8316896Juvenile bud stage 75.983
SRR8316897Juvenile bud stage 17.789
SRR8316894Third green stage 15.140
SRR8316900Third green stage 22.969
SRR8316901Third green stage 28.215
SRR8316898Complete white stage 6.464
SRR8316899Complete white stage 22.883
SRR8316903Complete white stage 19.454
SRR8316902Silver flowering stage4.980
SRR8316904Silver flowering stage6.489
SRR8316905Silver flowering stage4.026
SRR8316906Gold flowering stage 6.690
SRR8316907Gold flowering stage 8.836
SRR8316908Gold flowering stage 7.873
SRP132670SRR6706286Control11.745
SRR6706287Light intensity 50%15.438
SRR6706288Light intensity 20%13.466
CNP0000432CNS0095592Slightly white alabastrum(diploid) 110.369
CNS0095593Slightly white alabastrum(diploid) 210.048
CNS0095594Slightly white alabastrum(diploid) 310.355
CNS0095595Whole white alabastrum(diploid) 28.714
CNS0095596Whole white alabastrum(diploid) 33.861
CNS0095597Whole white alabastrum(diploid) 49.394
CNS0095598Silvery flower (diploied) 124.215
CNS0095599Silvery flower (diploied) 240.276
CNS0095600Silvery flower (diploied) 312.710
CNS0095601Golden flower (diploid) 169.946
CNS0095602Golden flower (diploid) 220.603
CNS0095603Golden flower (diploid) 318.644
CNS0095604Slightly white alabastrum(tetraploid) 115.439
CNS0095605Slightly white alabastrum(tetraploid) 214.472
CNS0095606Slightly white alabastrum(tetraploid) 322.086
CNS0095607Whole white alabastrum(tetraploid) 110.369
CNS0095608Whole white alabastrum(tetraploid) 22.170
CNS0095609Whole white alabastrum(tetraploid) 37.689
CNS0095610Silvery flower (tetraploid) 15.262
CNS0095611Silvery flower (tetraploid) 210.238
CNS0095612Silvery flower (tetraploid) 31.686
CNS0095613Golden flower (tetraploid) 13.292
CNS0095614Golden flower (tetraploid) 26.043
CNS0095615Golden flower (tetraploid) 33.500
CRA001975CRR073297Stem 14.202
CRR073298Stem 23.826
CRR073299Stem 30.223
CRR073300Leaf 14.600
CRR073301Leaf 24.675
CRR073302Leaf 30.801
CRR073303Juvenile bud 10.550
CRR073304Juvenile bud 20.045
CRR073305Juvenile bud 30.174
CRR073306Third green 10.084
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.178
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.368
CRR073316Gold flowering 20.149
CRR073317Gold flowering 30.107
CRR073318Tawny withering 10.628
CRR073319Tawny withering 20.696
CRR073320Tawny withering 31.142