Detail information of GWHGAAZE000232


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrNP_001268182.11.31815E-71uncharacterized protein LOC100251098 [Vitis vinifera]
Swissprottr|E3SXU4|BHLHW_PEA4E-68Basic helix-loop-helix protein A
trEMBLtr|B7SNG3|B7SNG3_VITVI5E-72BHLH-like DNA binding protein {ECO:0000313|EMBL:ACC68685.1}
TAIR10AT4G09820.15E-38basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene46208314621493+
GWHAAZE00000001mRNA46208314621493+
GWHAAZE00000001exon46208314621493+
GWHAAZE00000001CDS46208314621493+
Transcript Sequence

Network for GWHGAAZE000232

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.27HLH651121.70E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983molecular_functionprotein dimerization activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.350
SRR3591706second leaf0.171
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.875
SRR3591709Stem1.897
SRR3591710White floral bud1.543
SRR3591711White flower0.611
SRR3591712Green floral bud0.860
SRR3591713Yellow flower0.085
SRP173429 SRR8316895Juvenile bud stage 1.262
SRR8316896Juvenile bud stage 1.006
SRR8316897Juvenile bud stage 0.305
SRR8316894Third green stage 0.590
SRR8316900Third green stage 0.662
SRR8316901Third green stage 0.445
SRR8316898Complete white stage 0.324
SRR8316899Complete white stage 1.295
SRR8316903Complete white stage 0.871
SRR8316902Silver flowering stage0.100
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.317
SRR8316907Gold flowering stage 0.112
SRR8316908Gold flowering stage 0.361
SRP132670SRR6706286Control1.077
SRR6706287Light intensity 50%0.717
SRR6706288Light intensity 20%0.781
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.197
CNS0095593Slightly white alabastrum(diploid) 21.069
CNS0095594Slightly white alabastrum(diploid) 31.048
CNS0095595Whole white alabastrum(diploid) 21.283
CNS0095596Whole white alabastrum(diploid) 30.612
CNS0095597Whole white alabastrum(diploid) 40.359
CNS0095598Silvery flower (diploied) 11.860
CNS0095599Silvery flower (diploied) 21.917
CNS0095600Silvery flower (diploied) 30.492
CNS0095601Golden flower (diploid) 12.372
CNS0095602Golden flower (diploid) 21.490
CNS0095603Golden flower (diploid) 31.179
CNS0095604Slightly white alabastrum(tetraploid) 10.795
CNS0095605Slightly white alabastrum(tetraploid) 22.466
CNS0095606Slightly white alabastrum(tetraploid) 31.855
CNS0095607Whole white alabastrum(tetraploid) 11.097
CNS0095608Whole white alabastrum(tetraploid) 20.274
CNS0095609Whole white alabastrum(tetraploid) 30.188
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.148
CNS0095612Silvery flower (tetraploid) 30.420
CNS0095613Golden flower (tetraploid) 10.436
CNS0095614Golden flower (tetraploid) 20.090
CNS0095615Golden flower (tetraploid) 30.889
CRA001975CRR073297Stem 11.681
CRR073298Stem 21.413
CRR073299Stem 32.984
CRR073300Leaf 10.443
CRR073301Leaf 20.598
CRR073302Leaf 30.675
CRR073303Juvenile bud 11.206
CRR073304Juvenile bud 20.182
CRR073305Juvenile bud 30.478
CRR073306Third green 10.000
CRR073307Third green 20.096
CRR073308Third green 30.542
CRR073309Second white 10.000
CRR073310Second white 20.069
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.403
CRR073314Silver flowering 30.076
CRR073315Gold flowering 10.107
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.127
CRR073318Tawny withering 10.522
CRR073319Tawny withering 21.328
CRR073320Tawny withering 31.640