Detail information of GWHGAAEX018575/evm.TU.scaffold_95.133


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|297621203|ref|YP_003709340.1|4.00E-22serine/threonine PP2C protein phosphatase [Waddlia chondrophila WSU 86-1044]
KOGKOG06986.00E-163Serine/threonine protein phosphatase
nrgi|743769378|ref|XP_010914976.1|0PREDICTED: probable protein phosphatase 2C 57 [Elaeis guineensis]
Swissprottr|Q69VD9|P2C57_ORYSJ8.00E-178Probable protein phosphatase 2C 57
trEMBLtr|D7SUM8|D7SUM8_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI20977.3}
TAIRAT2G256206.00E-163DNA-binding protein phosphatase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010136771143699213-
Transcript Sequence

Network for GWHGAAEX018575

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1GO:0003677 DNA binding GOslim:molecular_function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds GOslim:molecular_function
GO:0004857 enzyme inhibitor activity GOslim:molecular_function
GO:0005975 carbohydrate metabolic process GOslim:biological_process
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006629 lipid metabolic process GOslim:biological_process
GO:0008081 phosphoric diester hydrolase activity GOslim:molecular_function
GO:0008234 cysteine-type peptidase activity GOslim:molecular_function
GO:0009055 electron carrier activity GOslim:molecular_function
GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity GOslim:molecular_function
GO:0015035 protein disulfide oxidoreductase activity GOslim:molecular_function
GO:0015267 channel activity GOslim:molecular_function
GO:0016020 membrane GOslim:cellular_component
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GOslim:molecular_function
GO:0016757 transferase activity, transferring glycosyl groups GOslim:molecular_function
GO:0046556 alpha-L-arabinofuranosidase activity GOslim:molecular_function
GO:0046983 protein dimerization activity GOslim:molecular_function
Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family
Transcription factor C2C2-Dof Family Transcription factor C2C2-Dof Family
Transcription factor NAC Family Transcription factor NAC Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00481.20PP2C853334.80E-67
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyDBP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0043169Molecular Functioncation binding
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.450
SRR2545915Juvenile tuber19.130
SRP108465SRR5643513five period of Gastrodia elata24.400
SRR5643514five period of Gastrodia elata15.790
SRR5643515five period of Gastrodia elata58.570
SRR5643524five period of Gastrodia elata15.540
SRR5643525five period of Gastrodia elata40.310
SRR5643528five period of Gastrodia elata109.090
SRR5643658five period of Gastrodia elata33.060
SRR5643659five period of Gastrodia elata22.950
SRR5643660five period of Gastrodia elata24.810
SRR5643661five period of Gastrodia elata29.240
SRR5643662five period of Gastrodia elata45.350
SRR5643663five period of Gastrodia elata37.120
SRR5643664five period of Gastrodia elata17.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.380
SRR6049655Rhizomagastrodiae_C368-T10_good_114.420
SRR6049656Rhizomagastrodiae_C368-T07_good_114.500
SRR6049657Rhizomagastrodiae_C368-T07_good_112.060
SRR6049658Rhizomagastrodiae_C368-T04_good_19.700
SRR6049659Rhizomagastrodiae_C368-T04_good_19.060
SRR6049660Rhizomagastrodiae_C368-T01_good_113.820
SRR6049661Rhizomagastrodiae_C368-T04_good_110.190
SRR6049662Rhizomagastrodiae_C368-T01_good_117.950
SRR6049663Rhizomagastrodiae_C368-T01_good_117.640
SRR6049664Rhizomagastrodiae_C368-T10_good_117.830
SRR6049665Rhizomagastrodiae_C368-T10_good_117.830
SRP279888GastroGastrodia elata tuber 18.42
JuvenJuvenile tuber11.76
Mother_GastroMother tuber of Gastrodia elata 20.67
Mother_JuvenMother tuber of Juvenile 16.71