Detail information of GWHGAAEX016970/evm.TU.scaffold_79.222


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|343085920|ref|YP_004775215.1|1.00E-47RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
nrgi|743761633|ref|XP_010943231.1|0PREDICTED: receptor-like protein kinase HAIKU2 [Elaeis guineensis]
Swissprottr|Q9LJM4|IKU2_ARATH0Receptor-like protein kinase HAIKU2 (Precursor)
trEMBLtr|V4T676|V4T676_9ROSI0Uncharacterized protein {ECO:0000313|EMBL:ESR46950.1}
TAIRAT3G197000Leucine-rich repeat protein kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008244320204436518+
Transcript Sequence

Network for GWHGAAEX016970

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4AP2/ERF-ERF_EAR_family AP2/ERF-ERF_EAR_family
GO:0003700 transcription factor activity, sequence-specific DNA binding GOslim:molecular_function
GO:0004672 protein kinase activity GOslim:molecular_function
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006468 protein phosphorylation GOslim:biological_process
GO:0016491 oxidoreductase activity GOslim:molecular_function
GO:0016758 transferase activity, transferring hexosyl groups GOslim:molecular_function
GO:0043565 sequence-specific DNA binding GOslim:molecular_function
map00561 Glycerolipid metabolism
map04923 Regulation of lipolysis in adipocytes
Transcription factor AP2/ERF-ERF Family Transcription factor AP2/ERF-ERF Family
Transcription factor LOB Family Transcription factor LOB Family
Transcription factor MYB Family Transcription factor MYB Family
Transcription factor NAC Family Transcription factor NAC Family
Transcription factor Tify Family Transcription factor Tify Family
Transcription factor WRKY Family Transcription factor WRKY Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08263.11LRRNT_222641.00E-07
PF00069.24Pkinase6649301.80E-43
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_LRR-XI-1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005515Molecular Functionprotein binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.220
SRR2545915Juvenile tuber24.300
SRP108465SRR5643513five period of Gastrodia elata6.820
SRR5643514five period of Gastrodia elata4.830
SRR5643515five period of Gastrodia elata26.580
SRR5643524five period of Gastrodia elata8.580
SRR5643525five period of Gastrodia elata19.990
SRR5643528five period of Gastrodia elata79.310
SRR5643658five period of Gastrodia elata19.350
SRR5643659five period of Gastrodia elata35.450
SRR5643660five period of Gastrodia elata18.360
SRR5643661five period of Gastrodia elata30.080
SRR5643662five period of Gastrodia elata34.330
SRR5643663five period of Gastrodia elata18.390
SRR5643664five period of Gastrodia elata51.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.560
SRR6049655Rhizomagastrodiae_C368-T10_good_18.900
SRR6049656Rhizomagastrodiae_C368-T07_good_112.660
SRR6049657Rhizomagastrodiae_C368-T07_good_111.900
SRR6049658Rhizomagastrodiae_C368-T04_good_113.230
SRR6049659Rhizomagastrodiae_C368-T04_good_119.030
SRR6049660Rhizomagastrodiae_C368-T01_good_133.640
SRR6049661Rhizomagastrodiae_C368-T04_good_117.270
SRR6049662Rhizomagastrodiae_C368-T01_good_117.840
SRR6049663Rhizomagastrodiae_C368-T01_good_147.900
SRR6049664Rhizomagastrodiae_C368-T10_good_18.460
SRR6049665Rhizomagastrodiae_C368-T10_good_18.460
SRP279888GastroGastrodia elata tuber 7.28
JuvenJuvenile tuber3.43
Mother_GastroMother tuber of Gastrodia elata 176.02
Mother_JuvenMother tuber of Juvenile 89.38