Detail information of GWHGAAEX016909/evm.TU.scaffold_79.155


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|271967988|ref|YP_003342184.1|7.00E-84amino acid transporter [Streptosporangium roseum DSM 43021]
KOGKOG12860Amino acid transporters
nrgi|672123069|ref|XP_008784883.1|0PREDICTED: cationic amino acid transporter 1-like, partial [Phoenix dactylifera]
Swissprottr|Q84MA5|CAAT1_ARATH0Cationic amino acid transporter 1
trEMBLtr|J3NEX7|J3NEX7_ORYBR0Uncharacterized protein {ECO:0000313|EnsemblPlants:OB12G25350.1}
TAIRAT4G211200amino acid transporter 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008229112032914919+
Transcript Sequence

Network for GWHGAAEX016909

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1GO:0003677 DNA binding GOslim:molecular_function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds GOslim:molecular_function
GO:0004857 enzyme inhibitor activity GOslim:molecular_function
GO:0005975 carbohydrate metabolic process GOslim:biological_process
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006629 lipid metabolic process GOslim:biological_process
GO:0008081 phosphoric diester hydrolase activity GOslim:molecular_function
GO:0008234 cysteine-type peptidase activity GOslim:molecular_function
GO:0009055 electron carrier activity GOslim:molecular_function
GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity GOslim:molecular_function
GO:0015035 protein disulfide oxidoreductase activity GOslim:molecular_function
GO:0015267 channel activity GOslim:molecular_function
GO:0016020 membrane GOslim:cellular_component
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GOslim:molecular_function
GO:0016757 transferase activity, transferring glycosyl groups GOslim:molecular_function
GO:0046556 alpha-L-arabinofuranosidase activity GOslim:molecular_function
GO:0046983 protein dimerization activity GOslim:molecular_function
Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family
Transcription factor C2C2-Dof Family Transcription factor C2C2-Dof Family
Transcription factor NAC Family Transcription factor NAC Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13520.5AA_permease_2624661.00E-41
PF13906.5AA_permease_C5035531.20E-15
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0022857Molecular Functiontransmembrane transporter activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.220
SRR2545915Juvenile tuber5.890
SRP108465SRR5643513five period of Gastrodia elata22.570
SRR5643514five period of Gastrodia elata23.560
SRR5643515five period of Gastrodia elata40.270
SRR5643524five period of Gastrodia elata44.030
SRR5643525five period of Gastrodia elata126.580
SRR5643528five period of Gastrodia elata167.740
SRR5643658five period of Gastrodia elata89.960
SRR5643659five period of Gastrodia elata30.410
SRR5643660five period of Gastrodia elata16.870
SRR5643661five period of Gastrodia elata44.630
SRR5643662five period of Gastrodia elata42.240
SRR5643663five period of Gastrodia elata40.660
SRR5643664five period of Gastrodia elata32.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.940
SRR6049655Rhizomagastrodiae_C368-T10_good_112.820
SRR6049656Rhizomagastrodiae_C368-T07_good_112.890
SRR6049657Rhizomagastrodiae_C368-T07_good_111.800
SRR6049658Rhizomagastrodiae_C368-T04_good_111.730
SRR6049659Rhizomagastrodiae_C368-T04_good_120.180
SRR6049660Rhizomagastrodiae_C368-T01_good_120.390
SRR6049661Rhizomagastrodiae_C368-T04_good_116.090
SRR6049662Rhizomagastrodiae_C368-T01_good_114.900
SRR6049663Rhizomagastrodiae_C368-T01_good_112.990
SRR6049664Rhizomagastrodiae_C368-T10_good_116.470
SRR6049665Rhizomagastrodiae_C368-T10_good_116.470
SRP279888GastroGastrodia elata tuber 22.37
JuvenJuvenile tuber5.88
Mother_GastroMother tuber of Gastrodia elata 109.61
Mother_JuvenMother tuber of Juvenile 36.38