Detail information of GWHGAAEX016755/evm.TU.scaffold_78.201


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|307129438|ref|YP_003881454.1|3.00E-61phospholipase C 4 [Dickeya dadantii 3937]
nrgi|672165751|ref|XP_008802791.1|0PREDICTED: non-specific phospholipase C1 [Phoenix dactylifera]
Swissprottr|Q8L7Y9|NPC1_ARATH0Non-specific phospholipase C1 (Precursor)
trEMBLtr|W9RP53|W9RP53_9ROSA0Phospholipase C 4 {ECO:0000313|EMBL:EXC01444.1}
TAIRAT1G072300non-specific phospholipase C1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008640008854008054+
Transcript Sequence

Network for GWHGAAEX016755

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1GO:0003677 DNA binding GOslim:molecular_function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds GOslim:molecular_function
GO:0004857 enzyme inhibitor activity GOslim:molecular_function
GO:0005975 carbohydrate metabolic process GOslim:biological_process
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006629 lipid metabolic process GOslim:biological_process
GO:0008081 phosphoric diester hydrolase activity GOslim:molecular_function
GO:0008234 cysteine-type peptidase activity GOslim:molecular_function
GO:0009055 electron carrier activity GOslim:molecular_function
GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity GOslim:molecular_function
GO:0015035 protein disulfide oxidoreductase activity GOslim:molecular_function
GO:0015267 channel activity GOslim:molecular_function
GO:0016020 membrane GOslim:cellular_component
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GOslim:molecular_function
GO:0016757 transferase activity, transferring glycosyl groups GOslim:molecular_function
GO:0046556 alpha-L-arabinofuranosidase activity GOslim:molecular_function
GO:0046983 protein dimerization activity GOslim:molecular_function
Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family
Transcription factor C2C2-Dof Family Transcription factor C2C2-Dof Family
Transcription factor NAC Family Transcription factor NAC Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04185.13Phosphoesterase434012.20E-104
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01114plc Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Inositol phosphate metabolismmap00562
Glycerophospholipid metabolismmap00564
Ether lipid metabolismmap00565
Quorum sensingmap02024
Thyroid hormone signaling pathwaymap04919

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity
GO:0016788Molecular Functionhydrolase activity, acting on ester bonds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.160
SRR2545915Juvenile tuber15.250
SRP108465SRR5643513five period of Gastrodia elata28.630
SRR5643514five period of Gastrodia elata45.840
SRR5643515five period of Gastrodia elata41.260
SRR5643524five period of Gastrodia elata51.690
SRR5643525five period of Gastrodia elata79.730
SRR5643528five period of Gastrodia elata83.670
SRR5643658five period of Gastrodia elata117.460
SRR5643659five period of Gastrodia elata25.580
SRR5643660five period of Gastrodia elata20.050
SRR5643661five period of Gastrodia elata27.800
SRR5643662five period of Gastrodia elata29.760
SRR5643663five period of Gastrodia elata23.420
SRR5643664five period of Gastrodia elata24.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_126.890
SRR6049655Rhizomagastrodiae_C368-T10_good_135.550
SRR6049656Rhizomagastrodiae_C368-T07_good_131.220
SRR6049657Rhizomagastrodiae_C368-T07_good_123.900
SRR6049658Rhizomagastrodiae_C368-T04_good_128.660
SRR6049659Rhizomagastrodiae_C368-T04_good_127.900
SRR6049660Rhizomagastrodiae_C368-T01_good_126.030
SRR6049661Rhizomagastrodiae_C368-T04_good_127.010
SRR6049662Rhizomagastrodiae_C368-T01_good_137.240
SRR6049663Rhizomagastrodiae_C368-T01_good_131.410
SRR6049664Rhizomagastrodiae_C368-T10_good_144.680
SRR6049665Rhizomagastrodiae_C368-T10_good_144.680
SRP279888GastroGastrodia elata tuber 21.78
JuvenJuvenile tuber19.20
Mother_GastroMother tuber of Gastrodia elata 117.30
Mother_JuvenMother tuber of Juvenile 64.29