Detail information of GWHGAAEX015046/evm.TU.scaffold_64.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|433654845|ref|YP_007298553.1|3.00E-18thioredoxin [Thermoanaerobacterium thermosaccharolyticum M0795]
KOGKOG09071.00E-48Thioredoxin
nrgi|672145384|ref|XP_008796609.1|4.53E-52PREDICTED: thioredoxin H1-like [Phoenix dactylifera]
Swissprottr|Q39239|TRXH4_ARATH3.00E-49Thioredoxin H4
trEMBLtr|M0S8V2|M0S8V2_MUSAM4.00E-50Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}
TAIRAT1G197301.00E-48Thioredoxin superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000067774314775604+
Transcript Sequence

Network for GWHGAAEX015046

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1GO:0003677 DNA binding GOslim:molecular_function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds GOslim:molecular_function
GO:0004857 enzyme inhibitor activity GOslim:molecular_function
GO:0005975 carbohydrate metabolic process GOslim:biological_process
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006629 lipid metabolic process GOslim:biological_process
GO:0008081 phosphoric diester hydrolase activity GOslim:molecular_function
GO:0008234 cysteine-type peptidase activity GOslim:molecular_function
GO:0009055 electron carrier activity GOslim:molecular_function
GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity GOslim:molecular_function
GO:0015035 protein disulfide oxidoreductase activity GOslim:molecular_function
GO:0015267 channel activity GOslim:molecular_function
GO:0016020 membrane GOslim:cellular_component
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GOslim:molecular_function
GO:0016757 transferase activity, transferring glycosyl groups GOslim:molecular_function
GO:0046556 alpha-L-arabinofuranosidase activity GOslim:molecular_function
GO:0046983 protein dimerization activity GOslim:molecular_function
Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family
Transcription factor C2C2-Dof Family Transcription factor C2C2-Dof Family
Transcription factor NAC Family Transcription factor NAC Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00085.19Thioredoxin121078.50E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03671trxA NOD-like receptor signaling pathway map04621

Gene Ontology

GO term OntologyName
GO:0045454Biological Processcell redox homeostasis

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms390.330
SRR2545915Juvenile tuber315.830
SRP108465SRR5643513five period of Gastrodia elata419.680
SRR5643514five period of Gastrodia elata698.870
SRR5643515five period of Gastrodia elata527.100
SRR5643524five period of Gastrodia elata633.460
SRR5643525five period of Gastrodia elata3224.890
SRR5643528five period of Gastrodia elata2277.480
SRR5643658five period of Gastrodia elata2802.620
SRR5643659five period of Gastrodia elata285.630
SRR5643660five period of Gastrodia elata333.480
SRR5643661five period of Gastrodia elata297.170
SRR5643662five period of Gastrodia elata408.110
SRR5643663five period of Gastrodia elata437.930
SRR5643664five period of Gastrodia elata512.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1299.230
SRR6049655Rhizomagastrodiae_C368-T10_good_1411.400
SRR6049656Rhizomagastrodiae_C368-T07_good_1286.780
SRR6049657Rhizomagastrodiae_C368-T07_good_1261.940
SRR6049658Rhizomagastrodiae_C368-T04_good_1416.160
SRR6049659Rhizomagastrodiae_C368-T04_good_1518.460
SRR6049660Rhizomagastrodiae_C368-T01_good_1350.360
SRR6049661Rhizomagastrodiae_C368-T04_good_1383.690
SRR6049662Rhizomagastrodiae_C368-T01_good_1576.300
SRR6049663Rhizomagastrodiae_C368-T01_good_1518.570
SRR6049664Rhizomagastrodiae_C368-T10_good_1563.090
SRR6049665Rhizomagastrodiae_C368-T10_good_1563.090
SRP279888GastroGastrodia elata tuber 762.35
JuvenJuvenile tuber375.24
Mother_GastroMother tuber of Gastrodia elata 1,763.80
Mother_JuvenMother tuber of Juvenile 771.69