Detail information of GWHGAAEX015027/evm.TU.scaffold_64.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672172403|ref|XP_008806291.1|6.45E-30PREDICTED: zinc finger protein 1-like [Phoenix dactylifera]
Swissprottr|Q42485|ZFP1_ARATH2.00E-22Zinc finger protein 1
trEMBLtr|M1B3Y0|M1B3Y0_SOLTU8.00E-27Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400036628}
TAIRAT5G109706.00E-23C2H2 and C2HC zinc fingers superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000067215703216746+
Transcript Sequence

Network for GWHGAAEX015027

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1GO:0003677 DNA binding GOslim:molecular_function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds GOslim:molecular_function
GO:0004857 enzyme inhibitor activity GOslim:molecular_function
GO:0005975 carbohydrate metabolic process GOslim:biological_process
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006629 lipid metabolic process GOslim:biological_process
GO:0008081 phosphoric diester hydrolase activity GOslim:molecular_function
GO:0008234 cysteine-type peptidase activity GOslim:molecular_function
GO:0009055 electron carrier activity GOslim:molecular_function
GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity GOslim:molecular_function
GO:0015035 protein disulfide oxidoreductase activity GOslim:molecular_function
GO:0015267 channel activity GOslim:molecular_function
GO:0016020 membrane GOslim:cellular_component
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GOslim:molecular_function
GO:0016757 transferase activity, transferring glycosyl groups GOslim:molecular_function
GO:0046556 alpha-L-arabinofuranosidase activity GOslim:molecular_function
GO:0046983 protein dimerization activity GOslim:molecular_function
Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family
Transcription factor C2C2-Dof Family Transcription factor C2C2-Dof Family
Transcription factor NAC Family Transcription factor NAC Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.880
SRR2545915Juvenile tuber6.270
SRP108465SRR5643513five period of Gastrodia elata55.650
SRR5643514five period of Gastrodia elata55.420
SRR5643515five period of Gastrodia elata18.180
SRR5643524five period of Gastrodia elata43.010
SRR5643525five period of Gastrodia elata112.550
SRR5643528five period of Gastrodia elata64.620
SRR5643658five period of Gastrodia elata136.620
SRR5643659five period of Gastrodia elata19.880
SRR5643660five period of Gastrodia elata20.190
SRR5643661five period of Gastrodia elata20.450
SRR5643662five period of Gastrodia elata38.800
SRR5643663five period of Gastrodia elata25.200
SRR5643664five period of Gastrodia elata33.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.890
SRR6049655Rhizomagastrodiae_C368-T10_good_117.020
SRR6049656Rhizomagastrodiae_C368-T07_good_112.280
SRR6049657Rhizomagastrodiae_C368-T07_good_115.430
SRR6049658Rhizomagastrodiae_C368-T04_good_130.930
SRR6049659Rhizomagastrodiae_C368-T04_good_132.930
SRR6049660Rhizomagastrodiae_C368-T01_good_113.400
SRR6049661Rhizomagastrodiae_C368-T04_good_126.200
SRR6049662Rhizomagastrodiae_C368-T01_good_120.770
SRR6049663Rhizomagastrodiae_C368-T01_good_114.260
SRR6049664Rhizomagastrodiae_C368-T10_good_126.180
SRR6049665Rhizomagastrodiae_C368-T10_good_126.180
SRP279888GastroGastrodia elata tuber 42.15
JuvenJuvenile tuber25.30
Mother_GastroMother tuber of Gastrodia elata 102.04
Mother_JuvenMother tuber of Juvenile 30.07