Detail information of GWHGAAEX014778/evm.TU.scaffold_62.37
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG4814 | 2.00E-145 | Uncharacterized conserved protein |
| nr | gi|672129502|ref|XP_008788260.1| | 0 | PREDICTED: uncharacterized protein LOC103706066 [Phoenix dactylifera] |
| trEMBL | tr|M0TVH8|M0TVH8_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P32260_001} |
| TAIR | AT5G48390_2 | 2.00E-145 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000060 | 1909560 | 1921541 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014778
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module14 | BES1_EAR_family BES1_EAR_family Carbohydrate-Binding Modules 43 Carbohydrate-Binding Modules 43 CYTOCHROME_P473_Family CYTOCHROME_P473_Family CYTOCHROME_P503_Family CYTOCHROME_P503_Family CYTOCHROME_P580_Family CYTOCHROME_P580_Family GO:0003677 DNA binding GOslim:molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding GOslim:molecular_function GO:0004497 monooxygenase activity GOslim:molecular_function GO:0005506 iron ion binding GOslim:molecular_function GO:0006869 lipid transport GOslim:biological_process GO:0008233 peptidase activity GOslim:molecular_function GO:0008515 sucrose transmembrane transporter activity GOslim:molecular_function GO:0015770 sucrose transport GOslim:biological_process GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GOslim:molecular_function GO:0016758 transferase activity, transferring hexosyl groups GOslim:molecular_function GO:0020037 heme binding GOslim:molecular_function GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity GOslim:molecular_function GO:0043565 sequence-specific DNA binding GOslim:molecular_function GO:0051321 meiotic cell cycle GOslim:biological_process GO:0071705 nitrogen compound transport GOslim:biological_process map04142 Lysosome map04612 Antigen processing and presentation map04712 Circadian rhythm - plant Protein Kinases RLK-Pelle_L-LEC Family Protein Kinases RLK-Pelle_L-LEC Family Transcription factor BES1 Family Transcription factor BES1 Family Transcription factor GARP-G2-like Family Transcription factor GARP-G2-like Family Transcription factor HB-other Family Transcription factor HB-other Family Transcription factor NF-YB Family Transcription factor NF-YB Family Transcription factor zf-HD Family Transcription factor zf-HD Family |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF08631.9 | SPO22 | 198 | 460 | 4.90E-36 |
| PF08631.9 | SPO22 | 471 | 663 | 1.30E-06 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0051321 | Biological Process | meiotic cell cycle |
| GO:0005515 | Molecular Function | protein binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.580 |
| SRR2545915 | Juvenile tuber | 1.410 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 1.150 |
| SRR5643514 | five period of Gastrodia elata | 1.210 | |
| SRR5643515 | five period of Gastrodia elata | 0.970 | |
| SRR5643524 | five period of Gastrodia elata | 1.130 | |
| SRR5643525 | five period of Gastrodia elata | 1.750 | |
| SRR5643528 | five period of Gastrodia elata | 1.720 | |
| SRR5643658 | five period of Gastrodia elata | 1.840 | |
| SRR5643659 | five period of Gastrodia elata | 1.160 | |
| SRR5643660 | five period of Gastrodia elata | 1.620 | |
| SRR5643661 | five period of Gastrodia elata | 1.530 | |
| SRR5643662 | five period of Gastrodia elata | 1.160 | |
| SRR5643663 | five period of Gastrodia elata | 1.180 | |
| SRR5643664 | five period of Gastrodia elata | 1.410 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 0.940 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 0.900 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 0.890 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 0.970 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.750 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.860 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.670 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 1.240 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 1.390 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.820 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 1.250 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 1.250 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 1.47 |
| Juven | Juvenile tuber | 1.59 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 3.48 | |
| Mother_Juven | Mother tuber of Juvenile | 1.42 |