Detail information of GWHGAAEX013589/evm.TU.scaffold_50.217


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|310825155|ref|YP_003957513.1|3.00E-97potassium transport system protein kup [Stigmatella aurantiaca DW4/3-1]
nrgi|695073939|ref|XP_009384154.1|0PREDICTED: probable potassium transporter 11 [Musa acuminata subsp. malaccensis]
Swissprottr|Q8VXB1|HAK12_ORYSJ0Putative potassium transporter 12
trEMBLtr|M0RT96|M0RT96_MUSAM0Potassium transporter {ECO:0000256|RuleBase:RU321113}
TAIRAT2G350600K+ uptake permease 11

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005347365694760884-
Transcript Sequence

Network for GWHGAAEX013589

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4AP2/ERF-ERF_EAR_family AP2/ERF-ERF_EAR_family
GO:0003700 transcription factor activity, sequence-specific DNA binding GOslim:molecular_function
GO:0004672 protein kinase activity GOslim:molecular_function
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006468 protein phosphorylation GOslim:biological_process
GO:0016491 oxidoreductase activity GOslim:molecular_function
GO:0016758 transferase activity, transferring hexosyl groups GOslim:molecular_function
GO:0043565 sequence-specific DNA binding GOslim:molecular_function
map00561 Glycerolipid metabolism
map04923 Regulation of lipolysis in adipocytes
Transcription factor AP2/ERF-ERF Family Transcription factor AP2/ERF-ERF Family
Transcription factor LOB Family Transcription factor LOB Family
Transcription factor MYB Family Transcription factor MYB Family
Transcription factor NAC Family Transcription factor NAC Family
Transcription factor Tify Family Transcription factor Tify Family
Transcription factor WRKY Family Transcription factor WRKY Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02705.15K_trans526224.90E-183
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0071805Biological Processpotassium ion transmembrane transport
GO:0015079Molecular Functionpotassium ion transmembrane transporter activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.760
SRR2545915Juvenile tuber11.140
SRP108465SRR5643513five period of Gastrodia elata8.490
SRR5643514five period of Gastrodia elata10.500
SRR5643515five period of Gastrodia elata11.940
SRR5643524five period of Gastrodia elata16.280
SRR5643525five period of Gastrodia elata18.600
SRR5643528five period of Gastrodia elata33.760
SRR5643658five period of Gastrodia elata22.610
SRR5643659five period of Gastrodia elata7.730
SRR5643660five period of Gastrodia elata6.920
SRR5643661five period of Gastrodia elata8.070
SRR5643662five period of Gastrodia elata14.840
SRR5643663five period of Gastrodia elata10.350
SRR5643664five period of Gastrodia elata13.230
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.380
SRR6049655Rhizomagastrodiae_C368-T10_good_19.060
SRR6049656Rhizomagastrodiae_C368-T07_good_17.680
SRR6049657Rhizomagastrodiae_C368-T07_good_17.550
SRR6049658Rhizomagastrodiae_C368-T04_good_18.090
SRR6049659Rhizomagastrodiae_C368-T04_good_18.110
SRR6049660Rhizomagastrodiae_C368-T01_good_110.330
SRR6049661Rhizomagastrodiae_C368-T04_good_17.400
SRR6049662Rhizomagastrodiae_C368-T01_good_111.390
SRR6049663Rhizomagastrodiae_C368-T01_good_111.210
SRR6049664Rhizomagastrodiae_C368-T10_good_16.940
SRR6049665Rhizomagastrodiae_C368-T10_good_16.940
SRP279888GastroGastrodia elata tuber 18.48
JuvenJuvenile tuber8.36
Mother_GastroMother tuber of Gastrodia elata 45.22
Mother_JuvenMother tuber of Juvenile 44.36