Detail information of GWHGAAEX010104/evm.TU.scaffold_27.66


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743774553|ref|XP_010917633.1|1.42E-112PREDICTED: uncharacterized protein LOC105042209 [Elaeis guineensis]
trEMBLtr|A0A068UE29|A0A068UE29_COFCA4.00E-98Coffea canephora
TAIRAT5G288303.00E-74calcium-binding EF hand family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002335021853544848-
Transcript Sequence

Network for GWHGAAEX010104

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4AP2/ERF-ERF_EAR_family AP2/ERF-ERF_EAR_family
GO:0003700 transcription factor activity, sequence-specific DNA binding GOslim:molecular_function
GO:0004672 protein kinase activity GOslim:molecular_function
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006468 protein phosphorylation GOslim:biological_process
GO:0016491 oxidoreductase activity GOslim:molecular_function
GO:0016758 transferase activity, transferring hexosyl groups GOslim:molecular_function
GO:0043565 sequence-specific DNA binding GOslim:molecular_function
map00561 Glycerolipid metabolism
map04923 Regulation of lipolysis in adipocytes
Transcription factor AP2/ERF-ERF Family Transcription factor AP2/ERF-ERF Family
Transcription factor LOB Family Transcription factor LOB Family
Transcription factor MYB Family Transcription factor MYB Family
Transcription factor NAC Family Transcription factor NAC Family
Transcription factor Tify Family Transcription factor Tify Family
Transcription factor WRKY Family Transcription factor WRKY Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms75.810
SRR2545915Juvenile tuber67.250
SRP108465SRR5643513five period of Gastrodia elata104.800
SRR5643514five period of Gastrodia elata110.580
SRR5643515five period of Gastrodia elata131.890
SRR5643524five period of Gastrodia elata131.070
SRR5643525five period of Gastrodia elata111.930
SRR5643528five period of Gastrodia elata174.850
SRR5643658five period of Gastrodia elata97.340
SRR5643659five period of Gastrodia elata67.730
SRR5643660five period of Gastrodia elata63.160
SRR5643661five period of Gastrodia elata74.630
SRR5643662five period of Gastrodia elata67.480
SRR5643663five period of Gastrodia elata53.980
SRR5643664five period of Gastrodia elata38.010
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_175.400
SRR6049655Rhizomagastrodiae_C368-T10_good_170.050
SRR6049656Rhizomagastrodiae_C368-T07_good_192.380
SRR6049657Rhizomagastrodiae_C368-T07_good_169.730
SRR6049658Rhizomagastrodiae_C368-T04_good_199.580
SRR6049659Rhizomagastrodiae_C368-T04_good_1107.150
SRR6049660Rhizomagastrodiae_C368-T01_good_187.260
SRR6049661Rhizomagastrodiae_C368-T04_good_189.270
SRR6049662Rhizomagastrodiae_C368-T01_good_1108.860
SRR6049663Rhizomagastrodiae_C368-T01_good_1122.420
SRR6049664Rhizomagastrodiae_C368-T10_good_1124.500
SRR6049665Rhizomagastrodiae_C368-T10_good_1124.500
SRP279888GastroGastrodia elata tuber 51.14
JuvenJuvenile tuber53.73
Mother_GastroMother tuber of Gastrodia elata 225.17
Mother_JuvenMother tuber of Juvenile 177.76