Detail information of GWHGAAEX008328/evm.TU.scaffold_214.42


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG05220Ankyrin repeat protein
nrgi|743776873|ref|XP_010918851.1|0PREDICTED: ankyrin repeat domain-containing protein 13C-like [Elaeis guineensis]
trEMBLtr|I1GUW9|I1GUW9_BRADI0Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI1G28990.1}
TAIRAT1G047800Ankyrin repeat family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000021711354141147176+
Transcript Sequence

Network for GWHGAAEX008328

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13857.5Ank_5681101.30E-07
PF11904.7GPCR_chapero_11866312.40E-98
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.430
SRR2545915Juvenile tuber15.710
SRP108465SRR5643513five period of Gastrodia elata18.480
SRR5643514five period of Gastrodia elata20.810
SRR5643515five period of Gastrodia elata16.260
SRR5643524five period of Gastrodia elata17.790
SRR5643525five period of Gastrodia elata24.540
SRR5643528five period of Gastrodia elata26.440
SRR5643658five period of Gastrodia elata26.460
SRR5643659five period of Gastrodia elata17.160
SRR5643660five period of Gastrodia elata19.570
SRR5643661five period of Gastrodia elata16.200
SRR5643662five period of Gastrodia elata15.840
SRR5643663five period of Gastrodia elata17.970
SRR5643664five period of Gastrodia elata17.300
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.830
SRR6049655Rhizomagastrodiae_C368-T10_good_118.230
SRR6049656Rhizomagastrodiae_C368-T07_good_116.620
SRR6049657Rhizomagastrodiae_C368-T07_good_118.280
SRR6049658Rhizomagastrodiae_C368-T04_good_117.770
SRR6049659Rhizomagastrodiae_C368-T04_good_117.810
SRR6049660Rhizomagastrodiae_C368-T01_good_117.830
SRR6049661Rhizomagastrodiae_C368-T04_good_115.470
SRR6049662Rhizomagastrodiae_C368-T01_good_114.590
SRR6049663Rhizomagastrodiae_C368-T01_good_115.750
SRR6049664Rhizomagastrodiae_C368-T10_good_115.190
SRR6049665Rhizomagastrodiae_C368-T10_good_115.190
SRP279888GastroGastrodia elata tuber 17.35
JuvenJuvenile tuber24.09
Mother_GastroMother tuber of Gastrodia elata 24.29
Mother_JuvenMother tuber of Juvenile 19.68