Gene detail

Detail information of GWHGAAEX005521/evm.TU.scaffold_165.35

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|695014312\|ref\|XP_009393972.1\|	1.21E-173	PREDICTED: protein trichome birefringence-like 4 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q9FG35\|TBR_ARATH	6.00E-157	Protein trichome birefringence
trEMBL	tr\|M0SI10\|M0SI10_MUSAM	5.00E-173	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P26440_001}
TAIR	AT5G06700	2.00E-156	Plant protein of unknown function (DUF828)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000167	1329530	1333102	+

Transcript Sequence
>GWHTAAEX005521 ATGGCGTCTAAAGAAGTCAAGAAACAGTTTATCAAGATGATGATGCAGGGAGTTTTGTGCTTCCAAATATCGCTGGGGTTCATCACAACCCTCACTACTTTCTTCGTCATCTTGGCCGTCCGTTACCCTTCCACTAAAATTATACTTCTCCACGGCACGCCTTTGCCTCACGCCAACTTCTCTTCATCTTCTTGCACTGTTTCCGGTAGTTTCAGTGATGTCAATGCGGTCGTCTCACCGCCCTCGCTGGCACCGGTAAATGCACCACTGCCATTCTGGGGCTTCAAAAAGCTTCCGTTTTCTGATGATAAGGGGAAGAGGGAGAAAAGAGTCGGTTTCCATCAAAATAACTGTGATCTGTTTGACGGGAGATGGGTGGAGGATCGAGAGAGCAGGCCTTTCTACCAAGCAGGATCCTGCCCGTTCGTTGAAGAGGCTTTTAACTGCTATAAAAATGGACGGCCGGATTTGAACTACACTCGGCTACGCTGGCAGCCTAAGGCCTGCTCCTTGCCCAGATTTGAAGGTAGAAAGCTGCTGGATATGCTGAAAGGGAAGAGACTGGCCTTCGTTGGAGATTCGCTGAACCGGAACATGTGGGAATCGCTCGTCTGCATTCTGAGAAATTCCTTGAGAAATAAAATAAGAGTTTTTGACATAACCGGCAAGGAGGAGTTCAAATATGAGAATTCCTACGCATTCAAATTCAGTGATTACAACTGCACAATAGAGTTCTTTCGATCGCCATTCCTAGTCCAAGAATGGGAGAGATTGGGCGCTAATGGCACTCGAAAGGAGTCCCTTCGGCTTGATTTGATGGACAAAACTTCCTCTTTGTATAAGACAGCAGACGTGATTGTATTCAATTCGGCACACTGGTGGACGCATGAGAAGACTTCTAAAGGGGAGCATTTCTATCAAGAAGGTGACTATGTCCATAGAAAACTCAGCGCCGGTGAAGCCTATCACAAAGCCCTAACCACTTGGGCTCGTTGGATAGATGAGAACATCGATCCAAACCGCACGATTGTCTTTTTTAGGGGCTACTCTTGGACTCATTTCAAAGGTGGGCAATGGAACTCTGGTGGCAACTGTGATGGAGAGACTCTGCCGATTATTGATGACAAACACTTAGCAAAATATCCAAATCTGTTAAAAATTATTGAGTCTGTCATGCTAAGGATGAGGACTCATGTTCTCTACCTCAACATAACAAGAATGACAGATTACAGGAAAGAGGCACATCCTTCTCTGTATCGTTTCCCACCCGAGAAGCAGCAATGGTCTGGGAAAAGCCAAGATTGTAGTCATTGGTGCCTTCCAGGAGTCCCTGACACGTGGAATGAACTCATGTACGCCATGCTTTTGCAGAGATTGAAGAGGTGAAGGATAAGATTAAGCATAGGAAGTAATATGCAATACATGTGAATTAT

Network for GWHGAAEX005521

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14416.5	PMR5N	117	169	6.60E-21
PF13839.5	PC-Esterase	171	454	1.90E-95

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.000
SRP064423	SRR2545915	Juvenile tuber	0.000
SRP108465	SRR5643513	five period of Gastrodia elata	0.000
	SRR5643514	five period of Gastrodia elata	0.000
	SRR5643515	five period of Gastrodia elata	0.000
	SRR5643524	five period of Gastrodia elata	0.000
	SRR5643525	five period of Gastrodia elata	0.000
	SRR5643528	five period of Gastrodia elata	0.120
	SRR5643658	five period of Gastrodia elata	0.090
	SRR5643659	five period of Gastrodia elata	0.000
	SRR5643660	five period of Gastrodia elata	0.000
	SRR5643661	five period of Gastrodia elata	0.000
	SRR5643662	five period of Gastrodia elata	0.000
	SRR5643663	five period of Gastrodia elata	0.000
	SRR5643664	five period of Gastrodia elata	0.000
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.000
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.000
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.000
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.000
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.000
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.000
SRP279888	Gastro	Gastrodia elata tuber	0.00
	Juven	Juvenile tuber	0.00
	Mother_Gastro	Mother tuber of Gastrodia elata	0.00
	Mother_Juven	Mother tuber of Juvenile	0.00