Detail information of GWHGAAEX004874/evm.TU.scaffold_155.68


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|728836935|gb|KHG16378.1|1.80E-69putative 39S ribosomal L53, mitochondrial [Gossypium arboreum]
trEMBLtr|E0CPL1|E0CPL1_VITVI1.00E-68Putative uncharacterized protein {ECO:0000313|EMBL:CBI19827.3}
TAIRAT5G396007.00E-64Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015222960552316872+
Transcript Sequence

Network for GWHGAAEX004874

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10780.8MRP_L5312637.60E-12
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms35.750
SRR2545915Juvenile tuber34.420
SRP108465SRR5643513five period of Gastrodia elata34.150
SRR5643514five period of Gastrodia elata31.180
SRR5643515five period of Gastrodia elata34.450
SRR5643524five period of Gastrodia elata30.920
SRR5643525five period of Gastrodia elata55.530
SRR5643528five period of Gastrodia elata65.800
SRR5643658five period of Gastrodia elata66.060
SRR5643659five period of Gastrodia elata33.180
SRR5643660five period of Gastrodia elata30.090
SRR5643661five period of Gastrodia elata33.220
SRR5643662five period of Gastrodia elata29.620
SRR5643663five period of Gastrodia elata28.810
SRR5643664five period of Gastrodia elata30.590
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_126.170
SRR6049655Rhizomagastrodiae_C368-T10_good_146.490
SRR6049656Rhizomagastrodiae_C368-T07_good_133.480
SRR6049657Rhizomagastrodiae_C368-T07_good_130.530
SRR6049658Rhizomagastrodiae_C368-T04_good_133.690
SRR6049659Rhizomagastrodiae_C368-T04_good_131.950
SRR6049660Rhizomagastrodiae_C368-T01_good_135.850
SRR6049661Rhizomagastrodiae_C368-T04_good_138.000
SRR6049662Rhizomagastrodiae_C368-T01_good_130.630
SRR6049663Rhizomagastrodiae_C368-T01_good_131.810
SRR6049664Rhizomagastrodiae_C368-T10_good_130.140
SRR6049665Rhizomagastrodiae_C368-T10_good_130.140
SRP279888GastroGastrodia elata tuber 48.26
JuvenJuvenile tuber38.62
Mother_GastroMother tuber of Gastrodia elata 79.96
Mother_JuvenMother tuber of Juvenile 49.40