Detail information of GWHGAAEX004555/evm.TU.scaffold_15.190
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|657366985|gb|KEH15120.1| | 3.84E-103 | NAC transcription factor-like protein, partial [Medicago truncatula] |
| Swissprot | tr|Q8H4S4|NAC10_ORYSJ | 1.00E-80 | NAC transcription factor ONAC010 |
| trEMBL | tr|A0A072TNF6|A0A072TNF6_MEDTR | 1.00E-103 | NAC transcription factor-like protein {ECO:0000313|EMBL:KEH15120.1} (Fragment) |
| TAIR | AT1G69490 | 6.00E-78 | NAC-like, activated by AP3/PI |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000019 | 3924069 | 3925500 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004555
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module1 | GO:0003677 DNA binding GOslim:molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds GOslim:molecular_function GO:0004857 enzyme inhibitor activity GOslim:molecular_function GO:0005975 carbohydrate metabolic process GOslim:biological_process GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process GO:0006629 lipid metabolic process GOslim:biological_process GO:0008081 phosphoric diester hydrolase activity GOslim:molecular_function GO:0008234 cysteine-type peptidase activity GOslim:molecular_function GO:0009055 electron carrier activity GOslim:molecular_function GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity GOslim:molecular_function GO:0015035 protein disulfide oxidoreductase activity GOslim:molecular_function GO:0015267 channel activity GOslim:molecular_function GO:0016020 membrane GOslim:cellular_component GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GOslim:molecular_function GO:0016757 transferase activity, transferring glycosyl groups GOslim:molecular_function GO:0046556 alpha-L-arabinofuranosidase activity GOslim:molecular_function GO:0046983 protein dimerization activity GOslim:molecular_function Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family Transcription factor C2C2-Dof Family Transcription factor C2C2-Dof Family Transcription factor NAC Family Transcription factor NAC Family |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF02365.14 | NAM | 10 | 136 | 9.90E-36 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 20.680 |
| SRR2545915 | Juvenile tuber | 22.070 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 68.410 |
| SRR5643514 | five period of Gastrodia elata | 18.240 | |
| SRR5643515 | five period of Gastrodia elata | 64.590 | |
| SRR5643524 | five period of Gastrodia elata | 26.260 | |
| SRR5643525 | five period of Gastrodia elata | 625.480 | |
| SRR5643528 | five period of Gastrodia elata | 1085.740 | |
| SRR5643658 | five period of Gastrodia elata | 437.790 | |
| SRR5643659 | five period of Gastrodia elata | 20.630 | |
| SRR5643660 | five period of Gastrodia elata | 15.130 | |
| SRR5643661 | five period of Gastrodia elata | 22.950 | |
| SRR5643662 | five period of Gastrodia elata | 146.320 | |
| SRR5643663 | five period of Gastrodia elata | 58.390 | |
| SRR5643664 | five period of Gastrodia elata | 140.170 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 47.940 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 15.040 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 32.180 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 53.170 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 104.210 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 129.540 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 56.410 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 83.240 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 22.940 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 33.210 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 20.040 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 20.040 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 134.27 |
| Juven | Juvenile tuber | 8.56 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 384.81 | |
| Mother_Juven | Mother tuber of Juvenile | 181.19 |