Detail information of GWHGAAEX003748/evm.TU.scaffold_14.39
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|743856748|ref|XP_010941940.1| | 9.54E-171 | PREDICTED: uncharacterized protein LOC105060052 [Elaeis guineensis] |
| trEMBL | tr|A5BVL4|A5BVL4_VITVI | 6.00E-161 | Putative uncharacterized protein {ECO:0000313|EMBL:CAN70606.1} |
| TAIR | AT5G11730 | 5.00E-152 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000012 | 1328816 | 1334068 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003748
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module1 | GO:0003677 DNA binding GOslim:molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds GOslim:molecular_function GO:0004857 enzyme inhibitor activity GOslim:molecular_function GO:0005975 carbohydrate metabolic process GOslim:biological_process GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process GO:0006629 lipid metabolic process GOslim:biological_process GO:0008081 phosphoric diester hydrolase activity GOslim:molecular_function GO:0008234 cysteine-type peptidase activity GOslim:molecular_function GO:0009055 electron carrier activity GOslim:molecular_function GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity GOslim:molecular_function GO:0015035 protein disulfide oxidoreductase activity GOslim:molecular_function GO:0015267 channel activity GOslim:molecular_function GO:0016020 membrane GOslim:cellular_component GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GOslim:molecular_function GO:0016757 transferase activity, transferring glycosyl groups GOslim:molecular_function GO:0046556 alpha-L-arabinofuranosidase activity GOslim:molecular_function GO:0046983 protein dimerization activity GOslim:molecular_function Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family Transcription factor C2C2-Dof Family Transcription factor C2C2-Dof Family Transcription factor NAC Family Transcription factor NAC Family |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF02485.20 | Branch | 114 | 339 | 4.50E-81 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0008375 | Molecular Function | acetylglucosaminyltransferase activity |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.490 |
| SRR2545915 | Juvenile tuber | 2.240 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 2.350 |
| SRR5643514 | five period of Gastrodia elata | 1.730 | |
| SRR5643515 | five period of Gastrodia elata | 4.510 | |
| SRR5643524 | five period of Gastrodia elata | 2.670 | |
| SRR5643525 | five period of Gastrodia elata | 46.930 | |
| SRR5643528 | five period of Gastrodia elata | 48.010 | |
| SRR5643658 | five period of Gastrodia elata | 25.450 | |
| SRR5643659 | five period of Gastrodia elata | 3.050 | |
| SRR5643660 | five period of Gastrodia elata | 0.530 | |
| SRR5643661 | five period of Gastrodia elata | 0.850 | |
| SRR5643662 | five period of Gastrodia elata | 5.330 | |
| SRR5643663 | five period of Gastrodia elata | 1.110 | |
| SRR5643664 | five period of Gastrodia elata | 15.320 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 5.580 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 3.780 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 3.410 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 3.670 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 6.550 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 8.860 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 12.150 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 8.690 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 3.280 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 5.850 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 3.150 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 3.150 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 1.72 |
| Juven | Juvenile tuber | 0.69 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 13.56 | |
| Mother_Juven | Mother tuber of Juvenile | 8.34 |