Detail information of GWHGAAEX003107/evm.TU.scaffold_13.122


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|440681521|ref|YP_007156316.1|1.00E-55Caffeoyl-CoA O-methyltransferase [Anabaena cylindrica PCC 7122]
KOGKOG16631.00E-94O-methyltransferase
nrgi|326486289|gb|ADZ76153.1|9.49E-114OMT4 [Vanilla planifolia]
Swissprottr|Q9C9W3|CAMT1_ARATH4.00E-95Putative caffeoyl-CoA O-methyltransferase At1g67980
trEMBLtr|F2YP45|F2YP45_VANPL4.00E-114OMT4 {ECO:0000313|EMBL:ADZ76153.1}
TAIRAT1G679801.00E-94caffeoyl-CoA 3-O-methyltransferase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000761978656198893+
Transcript Sequence

Network for GWHGAAEX003107

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module12AUX/IAA_EAR_family AUX/IAA_EAR_family
CYTOCHROME_P582_Family CYTOCHROME_P582_Family
GO:0004725 protein tyrosine phosphatase activity GOslim:molecular_function
GO:0008171 O-methyltransferase activity GOslim:molecular_function
GO:0009733 response to auxin GOslim:biological_process
GO:0010215 cellulose microfibril organization GOslim:biological_process
GO:0015079 potassium ion transmembrane transporter activity GOslim:molecular_function
GO:0031225 anchored component of membrane GOslim:cellular_component
GO:0071805 potassium ion transmembrane transport GOslim:biological_process
map02020 Two-component system
map04075 Plant hormone signal transduction
map04975 Fat digestion and absorption
Protein Kinases RLK-Pelle_WAK Family Protein Kinases RLK-Pelle_WAK Family
Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family
Transcription factor C2H2 Family Transcription factor C2H2 Family
Transcription factor SBP Family Transcription factor SBP Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01596.16Methyltransf_3242377.60E-87
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00588E2.1.1.104 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Phenylpropanoid biosynthesismap00940
Flavonoid biosynthesismap00941

Gene Ontology

GO term OntologyName
GO:0008171Molecular FunctionO-methyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms308.480
SRR2545915Juvenile tuber155.250
SRP108465SRR5643513five period of Gastrodia elata654.150
SRR5643514five period of Gastrodia elata599.950
SRR5643515five period of Gastrodia elata987.890
SRR5643524five period of Gastrodia elata900.440
SRR5643525five period of Gastrodia elata314.620
SRR5643528five period of Gastrodia elata584.340
SRR5643658five period of Gastrodia elata294.340
SRR5643659five period of Gastrodia elata68.220
SRR5643660five period of Gastrodia elata42.850
SRR5643661five period of Gastrodia elata86.650
SRR5643662five period of Gastrodia elata110.870
SRR5643663five period of Gastrodia elata86.560
SRR5643664five period of Gastrodia elata46.890
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1404.920
SRR6049655Rhizomagastrodiae_C368-T10_good_1609.430
SRR6049656Rhizomagastrodiae_C368-T07_good_1449.010
SRR6049657Rhizomagastrodiae_C368-T07_good_1237.010
SRR6049658Rhizomagastrodiae_C368-T04_good_1621.550
SRR6049659Rhizomagastrodiae_C368-T04_good_1552.700
SRR6049660Rhizomagastrodiae_C368-T01_good_1354.510
SRR6049661Rhizomagastrodiae_C368-T04_good_1397.220
SRR6049662Rhizomagastrodiae_C368-T01_good_1591.540
SRR6049663Rhizomagastrodiae_C368-T01_good_1795.360
SRR6049664Rhizomagastrodiae_C368-T10_good_1937.120
SRR6049665Rhizomagastrodiae_C368-T10_good_1937.120
SRP279888GastroGastrodia elata tuber 180.19
JuvenJuvenile tuber28.80
Mother_GastroMother tuber of Gastrodia elata 2,215.59
Mother_JuvenMother tuber of Juvenile 931.76