Detail information of GWHGAAEX001292/evm.TU.scaffold_108.67


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108802877|ref|YP_642814.1|1.00E-27serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
KOGKOG00320Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
nrgi|672160502|ref|XP_008800033.1|0PREDICTED: calcium-dependent protein kinase 29 [Phoenix dactylifera]
Swissprottr|Q8RWL2|CDPKT_ARATH0Calcium-dependent protein kinase 29
trEMBLtr|V4SL58|V4SL58_9ROSI0Uncharacterized protein {ECO:0000313|EMBL:ESR48493.1}
TAIRAT1G760400calcium-dependent protein kinase 29

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011720388492043126-
Transcript Sequence

Network for GWHGAAEX001292

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1GO:0003677 DNA binding GOslim:molecular_function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds GOslim:molecular_function
GO:0004857 enzyme inhibitor activity GOslim:molecular_function
GO:0005975 carbohydrate metabolic process GOslim:biological_process
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006629 lipid metabolic process GOslim:biological_process
GO:0008081 phosphoric diester hydrolase activity GOslim:molecular_function
GO:0008234 cysteine-type peptidase activity GOslim:molecular_function
GO:0009055 electron carrier activity GOslim:molecular_function
GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity GOslim:molecular_function
GO:0015035 protein disulfide oxidoreductase activity GOslim:molecular_function
GO:0015267 channel activity GOslim:molecular_function
GO:0016020 membrane GOslim:cellular_component
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GOslim:molecular_function
GO:0016757 transferase activity, transferring glycosyl groups GOslim:molecular_function
GO:0046556 alpha-L-arabinofuranosidase activity GOslim:molecular_function
GO:0046983 protein dimerization activity GOslim:molecular_function
Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family
Transcription factor C2C2-Dof Family Transcription factor C2C2-Dof Family
Transcription factor NAC Family Transcription factor NAC Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase783343.00E-72
PF13499.5EF-hand_73824422.20E-12
PF13499.5EF-hand_74525143.10E-12
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
K13412CPK Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0005509Molecular Functioncalcium ion binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms48.990
SRR2545915Juvenile tuber41.530
SRP108465SRR5643513five period of Gastrodia elata20.350
SRR5643514five period of Gastrodia elata21.050
SRR5643515five period of Gastrodia elata17.360
SRR5643524five period of Gastrodia elata21.330
SRR5643525five period of Gastrodia elata106.700
SRR5643528five period of Gastrodia elata74.860
SRR5643658five period of Gastrodia elata50.700
SRR5643659five period of Gastrodia elata24.460
SRR5643660five period of Gastrodia elata30.570
SRR5643661five period of Gastrodia elata24.530
SRR5643662five period of Gastrodia elata33.920
SRR5643663five period of Gastrodia elata28.610
SRR5643664five period of Gastrodia elata33.100
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.210
SRR6049655Rhizomagastrodiae_C368-T10_good_130.620
SRR6049656Rhizomagastrodiae_C368-T07_good_125.760
SRR6049657Rhizomagastrodiae_C368-T07_good_127.790
SRR6049658Rhizomagastrodiae_C368-T04_good_125.400
SRR6049659Rhizomagastrodiae_C368-T04_good_128.730
SRR6049660Rhizomagastrodiae_C368-T01_good_122.150
SRR6049661Rhizomagastrodiae_C368-T04_good_128.030
SRR6049662Rhizomagastrodiae_C368-T01_good_119.210
SRR6049663Rhizomagastrodiae_C368-T01_good_117.160
SRR6049664Rhizomagastrodiae_C368-T10_good_122.330
SRR6049665Rhizomagastrodiae_C368-T10_good_122.330
SRP279888GastroGastrodia elata tuber 44.19
JuvenJuvenile tuber25.21
Mother_GastroMother tuber of Gastrodia elata 52.82
Mother_JuvenMother tuber of Juvenile 27.23