Detail information of GWHGAAEX000647/evm.TU.scaffold_1.451


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743854522|ref|XP_010940922.1|1.56E-40PREDICTED: protein TPX2-like [Elaeis guineensis]
Swissprottr|F4I2H7|TPX2_ARATH4.00E-16Protein TPX2
trEMBLtr|V7CE15|V7CE15_PHAVU2.00E-29Uncharacterized protein {ECO:0000313|EMBL:ESW27608.1}
TAIRAT4G228601.00E-21Cell cycle regulated microtubule associated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000082137811321423280-
Transcript Sequence

Network for GWHGAAEX000647

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1GO:0003677 DNA binding GOslim:molecular_function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds GOslim:molecular_function
GO:0004857 enzyme inhibitor activity GOslim:molecular_function
GO:0005975 carbohydrate metabolic process GOslim:biological_process
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006629 lipid metabolic process GOslim:biological_process
GO:0008081 phosphoric diester hydrolase activity GOslim:molecular_function
GO:0008234 cysteine-type peptidase activity GOslim:molecular_function
GO:0009055 electron carrier activity GOslim:molecular_function
GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity GOslim:molecular_function
GO:0015035 protein disulfide oxidoreductase activity GOslim:molecular_function
GO:0015267 channel activity GOslim:molecular_function
GO:0016020 membrane GOslim:cellular_component
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GOslim:molecular_function
GO:0016757 transferase activity, transferring glycosyl groups GOslim:molecular_function
GO:0046556 alpha-L-arabinofuranosidase activity GOslim:molecular_function
GO:0046983 protein dimerization activity GOslim:molecular_function
Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family
Transcription factor C2C2-Dof Family Transcription factor C2C2-Dof Family
Transcription factor NAC Family Transcription factor NAC Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12214.7TPX2_importin1232282.80E-25
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.140
SRR2545915Juvenile tuber1.880
SRP108465SRR5643513five period of Gastrodia elata1.500
SRR5643514five period of Gastrodia elata0.630
SRR5643515five period of Gastrodia elata1.260
SRR5643524five period of Gastrodia elata0.490
SRR5643525five period of Gastrodia elata2.420
SRR5643528five period of Gastrodia elata8.230
SRR5643658five period of Gastrodia elata3.080
SRR5643659five period of Gastrodia elata0.780
SRR5643660five period of Gastrodia elata0.490
SRR5643661five period of Gastrodia elata3.650
SRR5643662five period of Gastrodia elata2.860
SRR5643663five period of Gastrodia elata1.170
SRR5643664five period of Gastrodia elata1.940
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.180
SRR6049655Rhizomagastrodiae_C368-T10_good_10.290
SRR6049656Rhizomagastrodiae_C368-T07_good_10.460
SRR6049657Rhizomagastrodiae_C368-T07_good_10.630
SRR6049658Rhizomagastrodiae_C368-T04_good_10.820
SRR6049659Rhizomagastrodiae_C368-T04_good_10.540
SRR6049660Rhizomagastrodiae_C368-T01_good_10.240
SRR6049661Rhizomagastrodiae_C368-T04_good_10.970
SRR6049662Rhizomagastrodiae_C368-T01_good_10.800
SRR6049663Rhizomagastrodiae_C368-T01_good_10.570
SRR6049664Rhizomagastrodiae_C368-T10_good_10.900
SRR6049665Rhizomagastrodiae_C368-T10_good_10.900
SRP279888GastroGastrodia elata tuber 1.09
JuvenJuvenile tuber0.94
Mother_GastroMother tuber of Gastrodia elata 2.27
Mother_JuvenMother tuber of Juvenile 1.45