Detail information of GWHGAAEX018969/evm.TU.scaffold_99.192


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|257094183|ref|YP_003167824.1|3.00E-23WD-40 repeat-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1]
KOGKOG02831.00E-152WD40 repeat-containing protein
nrgi|743777694|ref|XP_010919285.1|0PREDICTED: uncharacterized protein LOC105043440 isoform X1 [Elaeis guineensis]
Swissprottr|Q6S7B0|TAF5_ARATH6.00E-11Transcription initiation factor TFIID subunit 5
trEMBLtr|M0SYP3|M0SYP3_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P15140_001}
TAIRAT5G243201.00E-152Transducin/WD40 repeat-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009839372563941718+
Transcript Sequence

Network for GWHGAAEX018969

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4AP2/ERF-ERF_EAR_family AP2/ERF-ERF_EAR_family
GO:0003700 transcription factor activity, sequence-specific DNA binding GOslim:molecular_function
GO:0004672 protein kinase activity GOslim:molecular_function
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006468 protein phosphorylation GOslim:biological_process
GO:0016491 oxidoreductase activity GOslim:molecular_function
GO:0016758 transferase activity, transferring hexosyl groups GOslim:molecular_function
GO:0043565 sequence-specific DNA binding GOslim:molecular_function
map00561 Glycerolipid metabolism
map04923 Regulation of lipolysis in adipocytes
Transcription factor AP2/ERF-ERF Family Transcription factor AP2/ERF-ERF Family
Transcription factor LOB Family Transcription factor LOB Family
Transcription factor MYB Family Transcription factor MYB Family
Transcription factor NAC Family Transcription factor NAC Family
Transcription factor Tify Family Transcription factor Tify Family
Transcription factor WRKY Family Transcription factor WRKY Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00400.31WD402292627.40E-08
PF00400.31WD403313655.30E-06
PF00400.31WD403714081.10E-05
PF00400.31WD405205430.11
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyDWD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.470
SRR2545915Juvenile tuber5.480
SRP108465SRR5643513five period of Gastrodia elata5.540
SRR5643514five period of Gastrodia elata10.520
SRR5643515five period of Gastrodia elata5.660
SRR5643524five period of Gastrodia elata9.300
SRR5643525five period of Gastrodia elata9.630
SRR5643528five period of Gastrodia elata10.710
SRR5643658five period of Gastrodia elata8.870
SRR5643659five period of Gastrodia elata3.500
SRR5643660five period of Gastrodia elata3.270
SRR5643661five period of Gastrodia elata3.050
SRR5643662five period of Gastrodia elata2.750
SRR5643663five period of Gastrodia elata2.450
SRR5643664five period of Gastrodia elata3.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.920
SRR6049655Rhizomagastrodiae_C368-T10_good_14.440
SRR6049656Rhizomagastrodiae_C368-T07_good_14.260
SRR6049657Rhizomagastrodiae_C368-T07_good_13.530
SRR6049658Rhizomagastrodiae_C368-T04_good_13.740
SRR6049659Rhizomagastrodiae_C368-T04_good_13.770
SRR6049660Rhizomagastrodiae_C368-T01_good_13.310
SRR6049661Rhizomagastrodiae_C368-T04_good_13.690
SRR6049662Rhizomagastrodiae_C368-T01_good_15.260
SRR6049663Rhizomagastrodiae_C368-T01_good_13.300
SRR6049664Rhizomagastrodiae_C368-T10_good_15.770
SRR6049665Rhizomagastrodiae_C368-T10_good_15.770
SRP279888GastroGastrodia elata tuber 5.22
JuvenJuvenile tuber8.06
Mother_GastroMother tuber of Gastrodia elata 14.28
Mother_JuvenMother tuber of Juvenile 16.37