Detail information of GWHGAAEX018914/evm.TU.scaffold_99.128


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|440684664|ref|YP_007159459.1|8.00E-74Cellulase [Anabaena cylindrica PCC 7122]
nrgi|672189236|ref|XP_008813788.1|0PREDICTED: endoglucanase 12-like [Phoenix dactylifera]
Swissprottr|Q7XUK4|GUN12_ORYSJ0Endoglucanase 12
trEMBLtr|A0A059DC05|A0A059DC05_EUCGR0Endoglucanase {ECO:0000256|RuleBase:RU361166}
TAIRAT1G656100Six-hairpin glycosidases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009823035552308598-
Transcript Sequence

Network for GWHGAAEX018914

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module12AUX/IAA_EAR_family AUX/IAA_EAR_family
CYTOCHROME_P582_Family CYTOCHROME_P582_Family
GO:0004725 protein tyrosine phosphatase activity GOslim:molecular_function
GO:0008171 O-methyltransferase activity GOslim:molecular_function
GO:0009733 response to auxin GOslim:biological_process
GO:0010215 cellulose microfibril organization GOslim:biological_process
GO:0015079 potassium ion transmembrane transporter activity GOslim:molecular_function
GO:0031225 anchored component of membrane GOslim:cellular_component
GO:0071805 potassium ion transmembrane transport GOslim:biological_process
map02020 Two-component system
map04075 Plant hormone signal transduction
map04975 Fat digestion and absorption
Protein Kinases RLK-Pelle_WAK Family Protein Kinases RLK-Pelle_WAK Family
Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family
Transcription factor C2H2 Family Transcription factor C2H2 Family
Transcription factor SBP Family Transcription factor SBP Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00759.18Glyco_hydro_91115844.00E-119
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01179E3.2.1.4 Metabolic pathways map01100
Starch and sucrose metabolismmap00500
Two-component systemmap02020

Gene Ontology

GO term OntologyName
GO:0005975Biological Processcarbohydrate metabolic process
GO:0003824Molecular Functioncatalytic activity
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.690
SRR2545915Juvenile tuber2.160
SRP108465SRR5643513five period of Gastrodia elata15.050
SRR5643514five period of Gastrodia elata11.900
SRR5643515five period of Gastrodia elata22.350
SRR5643524five period of Gastrodia elata17.750
SRR5643525five period of Gastrodia elata32.040
SRR5643528five period of Gastrodia elata82.410
SRR5643658five period of Gastrodia elata49.240
SRR5643659five period of Gastrodia elata6.700
SRR5643660five period of Gastrodia elata5.140
SRR5643661five period of Gastrodia elata7.250
SRR5643662five period of Gastrodia elata6.610
SRR5643663five period of Gastrodia elata6.040
SRR5643664five period of Gastrodia elata5.150
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.770
SRR6049655Rhizomagastrodiae_C368-T10_good_17.350
SRR6049656Rhizomagastrodiae_C368-T07_good_16.600
SRR6049657Rhizomagastrodiae_C368-T07_good_14.230
SRR6049658Rhizomagastrodiae_C368-T04_good_14.640
SRR6049659Rhizomagastrodiae_C368-T04_good_13.450
SRR6049660Rhizomagastrodiae_C368-T01_good_12.890
SRR6049661Rhizomagastrodiae_C368-T04_good_15.120
SRR6049662Rhizomagastrodiae_C368-T01_good_14.680
SRR6049663Rhizomagastrodiae_C368-T01_good_16.370
SRR6049664Rhizomagastrodiae_C368-T10_good_19.130
SRR6049665Rhizomagastrodiae_C368-T10_good_19.130
SRP279888GastroGastrodia elata tuber 11.29
JuvenJuvenile tuber4.49
Mother_GastroMother tuber of Gastrodia elata 99.41
Mother_JuvenMother tuber of Juvenile 58.34