Detail information of GWHGAAEX018721/evm.TU.scaffold_97.126


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672127103|ref|XP_008787013.1|1.55E-85PREDICTED: protein YABBY 4-like [Phoenix dactylifera]
Swissprottr|Q0JBF0|YAB5_ORYSJ4.00E-68Protein YABBY 5
trEMBLtr|M0RP60|M0RP60_MUSAM8.00E-84Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P03800_001}
TAIRAT2G451901.00E-61Plant-specific transcription factor YABBY family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010233351303343795-
Transcript Sequence

Network for GWHGAAEX018721

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04690.12YABBY161725.10E-68
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-YABBY

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0007275Biological Processmulticellular organism development

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.210
SRR2545915Juvenile tuber0.240
SRP108465SRR5643513five period of Gastrodia elata0.110
SRR5643514five period of Gastrodia elata0.670
SRR5643515five period of Gastrodia elata0.100
SRR5643524five period of Gastrodia elata0.550
SRR5643525five period of Gastrodia elata0.560
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.100
SRR6049655Rhizomagastrodiae_C368-T10_good_10.120
SRR6049656Rhizomagastrodiae_C368-T07_good_10.170
SRR6049657Rhizomagastrodiae_C368-T07_good_10.620
SRR6049658Rhizomagastrodiae_C368-T04_good_10.100
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.940
SRR6049661Rhizomagastrodiae_C368-T04_good_11.580
SRR6049662Rhizomagastrodiae_C368-T01_good_10.710
SRR6049663Rhizomagastrodiae_C368-T01_good_10.390
SRR6049664Rhizomagastrodiae_C368-T10_good_10.740
SRR6049665Rhizomagastrodiae_C368-T10_good_10.740
SRP279888GastroGastrodia elata tuber 0.03
JuvenJuvenile tuber0.11
Mother_GastroMother tuber of Gastrodia elata 0.00
Mother_JuvenMother tuber of Juvenile 0.00